Job Description P09126 Confidence 100.00% Date Thu Jan 5 11:01:52 GMT 2012 Rank 7 Aligned Residues 192 % Identity 19% Template c3p9zA_ PDB info PDB header:ligase Chain: A: PDB Molecule:uroporphyrinogen iii cosynthase (hemd); PDBTitle: crystal structure of uroporphyrinogen-iii synthetase from helicobacter2 pylori 26695 Resolution 2.10 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	.	R	K	W	P	R	L	P	D	Y	F	A	I	G	R	T	T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q
Query Conservation																																																	.
Alig confidence																.	.	.	.	.	.	.																											.
Template Conservation																.	.	.	.	.	.	.
Template Sequence		L	I	L	N	E	F	C	Y	Y	P	L	E	L	D	.	.	.	.	.	.	.	P	T	P	F	N	A	L	I	F	T	S	K	N	A	V	F	S	L	L	E	T	L	K	N	S	P	K	L	K	X	L	Q	N	I	P	A	Y	A	L	S	E	P	T	A	K	T	L	Q	D	H	H	F	K	V	A	F	X	G	E
Template Known Secondary structure														S		.	.	.	.	.	.	.		T	T		S					S												T	T	T									T	S					S	S										T	T			B
Template Predicted Secondary structure																.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S	G
Query Conservation
Alig confidence			.	.	.	.	.	.							.	.	.	.	.																																								.
Template Conservation			.	.	.	.	.	.							.	.	.	.	.																																								.
Template Sequence		E	.	.	.	.	.	.	I	F	P	L	L	E	.	.	.	.	.	K	K	S	V	L	Y	L	R	A	K	E	I	V	S	S	L	D	T	I	L	L	E	H	G	I	D	F	K	Q	A	V	V	Y	E	N	K	L	K	H	.	L	T	L	S	E	Q	N	A	L	K	P	K	E	K	S	I	L	I	F	T	A	I
Template Known Secondary structure			.	.	.	.	.	.						T	.	.	.	.	.	T									S	S		S	S									T	T																.										S			T	T							S
Template Predicted Secondary structure			.	.	.	.	.	.							.	.	.	.	.																																								.
Template SS confidence
		100							.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	S	E	R	L	A	K	L	A	R	E	L	G	W	Q	D	I	K	V	A	D	N	A	D	N	D	A	L	L	R	A	L	Q
Query Conservation
Alig confidence													.	.	.	.	.	.																											.
Template Conservation													.	.	.	.	.	.																											.
Template Sequence		S	H	A	K	A	F	L	H	Y	F	E	.	.	.	.	.	.	F	L	E	N	Y	T	A	I	S	I	G	N	T	T	A	L	Y	L	Q	E	Q	G	I	P	S	Y	.	I	A	K	K	P	S	L	E	A	C	L	E	L	A	L
Template Known Secondary structure											S		.	.	.	.	.	.			T	T						S	S										T	T					.			S	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.																											.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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