Job Description P09126 Confidence 22.79% Date Thu Jan 5 11:01:52 GMT 2012 Rank 239 Aligned Residues 112 % Identity 21% Template c3lteH_ PDB info PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		A	G	K	R	A	L	I	L	R	G	N	G	G	R	.	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E
Query Conservation																.
Alig confidence																.																		.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.
Template Sequence		Q	S	K	R	I	L	V	V	D	D	D	Q	A	M	A	A	A	I	E	R	V	L	K	R	D	H	W	Q	V	E	I	A	.	.	.	.	.	.	.	.	.	H	N	G	F	D	A	G	I	K	L	S	T	F	E	P	A	I	M	T	L	D	L	S	M	P	K	L	D	G	L	D	V	I	R	S	L	R	Q	N
Template Known Secondary structure		G	G	G							S															T	T							.	.	.	.	.	.	.	.	.	S	S											T			S						S			S	S													T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		H	W	L	L	H	C	R	L	L	V	V	S	E	.	.	.	R	L	A	K	L	A	R	E	L	G	W	Q	D	I	K	V	A	D	N	A	D	N	D	A	L	L	R	A	L	Q
Query Conservation															.	.	.
Alig confidence															.	.	.												.
Template Conservation																													.
Template Sequence		K	V	A	N	Q	P	K	I	L	V	V	S	G	L	D	K	A	K	L	Q	Q	A	V	T	E	G	A	.	D	D	Y	L	E	K	P	F	D	N	D	A	L	L	D	R	I	H
Template Known Secondary structure		T		S	S										S											T	T		.	S					S	S
Template Predicted Secondary structure																													.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions