Job Description P09126 Confidence 24.34% Date Thu Jan 5 11:01:52 GMT 2012 Rank 220 Aligned Residues 94 % Identity 10% Template c3jpyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b Resolution 3.21 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	.	.	.	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.																				.	.	.
Template Conservation																																																											.	.	.
Template Sequence		G	P	S	I	E	Q	Q	A	S	V	M	L	N	I	M	E	E	Y	D	W	Y	I	F	S	I	V	T	T	Y	F	P	G	Y	Q	D	F	V	N	K	I	R	S	T	I	E	N	S	F	V	G	W	E	L	E	E	V	L	.	.	.	L	L	D	M	S	S	K	I	Q	N	Q	L	K	K	L	Q	S	P	I	I
Template Known Secondary structure		S																	T	T										S	S	T	T														T		S	S									.	.	.							T						T	T				S
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	Y	C	T	K	E	E	A	T	Y	I	F	E	V	A	N	S	V	G
Template Known Secondary structure					S														T	T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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