Job Description P09126 Confidence 82.79% Date Thu Jan 5 11:01:52 GMT 2012 Rank 23 Aligned Residues 126 % Identity 12% Template c3hn0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of an abc transporter (bdi_1369) from2 parabacteroides distasonis at 1.75 a resolution Resolution 1.75 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R	L	P	D	Y	F	A	I	G	R	T	T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template Sequence		K	V	Q	V	K	V	V	D	S	P	D	L	A	Q	A	L	L	I	K	.	.	.	.	.	.	.	.	.	Q	E	T	D	I	A	V	L	P	X	I	N	A	A	N	L	Y	N	K	G	I	K	I	K	L	A	G	C	P	I	W	G	T	L	Y	L	V	E	K	.	.	.	T	P	L	K	E	P	A	L	Y	V
Template Known Secondary structure									S											T	.	.	.	.	.	.	.	.	.	T			S															T	T		S																		.	.	.	S	S			S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																																								.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120
		132		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	R	G	N	G	G	R	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S
Query Conservation			.
Alig confidence			.																												.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		F	G	N	G	T	T	P	D	I	L	T	R	Y	Y	L	G	R	Q	R	L	D	Y	P	L	N	Y	A	F	N	.	.	.	.	.	.	T	A	G	E	I	T	Q	G	I	L	A	G	K	V	N	R	A	V	L	G	E	P	F	L	S	I	A	L	R	K
Template Known Secondary structure		S	S	T	T	S														T								S			.	.	.	.	.	.	S											T	S		S						T	T
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions