Return to main results Retrieve Phyre Job Id

Job DescriptionP09126
Confidence44.49%DateThu Jan 5 11:01:52 GMT 2012
Rank129Aligned Residues142
% Identity13%Templatec3gg9C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein; PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.. .......20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 


.


















Query SS confidence 











.


































































Query Sequence  MSILVTRPSPAG. EELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWP
Query Conservation 
 





    .  
   
   
      
 
   
             
   
 




  

      
        
Alig confidence 











.

















.......
























......










Template Conservation 


 
 
        
          
    .......       

   
   
  
     ......  
    
   
Template Sequence  LKIAVLDDYQDAVRKLDCFSLLQDHEVKVFN. . . . . . . NTVKGVGQLAARVADVEALVLIRER. . . . . . TRVTRQLLDRL
Template Known Secondary structure 



TT

GGGSGGGGGGTTS

.......S


STTT
S
TTS......S
B
TT
Template Predicted Secondary structure 










.......











......




Template SS confidence 















































































   12.......20.........30.........40.. .......50.........60....... ..70........
 
   80....... ..90. ........100.........110.........120.
Predicted Secondary structure 


...
....













...............................
Query SS confidence 







. . .



. . . .





























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  RLPDYFAI. . . GRTT. . . . ALALHTVSGQKILYPQDREISEVLLQLPEL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation        

...
  
....
  
   
            

 
      ...............................
Alig confidence 







...



....














...











...............................
Template Conservation 
 

 
       
 
 

       

 
 
  ...    



  
   
   
           
 
          
Template Sequence  PKLKIISQTGRVSRDGHIDLEACTDKGVVVLEGK. . . GSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTM
Template Known Secondary structure  TT

SS






B
TT



...

STTTT
TT





TTS
Template Predicted Secondary structure 

















...

















Template SS confidence 















































































   7980.........90.........100.........110.. .......120.........130.........140.........150.....
 
   122.......130.........140.........150........
Predicted Secondary structure  .......















Query SS confidence  . . . . . . .




































Query Sequence  . . . . . . . QNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECY
Query Conservation  .......       

   
      
   
   
  
     
Alig confidence  .......




































Template Conservation        
  
 
 





 
 

  

  
 


  
      
Template Sequence  PPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRE
Template Known Secondary structure 
TTTTS



TT


STT

S
Template Predicted Secondary structure 




















Template SS confidence 











































   158.160.........170.........180.........190.........200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions