 |
Job Description | P09126 | Confidence | 22.04% | Date | Thu Jan 5 11:01:52 GMT 2012 |
Rank | 243 | Aligned Residues | 98 |
% Identity | 10% | Template | c3ddhA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative haloacid dehalogenase-like family hydrolase; |
PDBTitle: the structure of a putative haloacid dehalogenase-like family2 hydrolase from bacteroides thetaiotaomicron vpi-5482
|
Resolution | 2.00 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | P | S | P | A | G | E | E | L | V | S | R | L | R | T | L | G | Q | V | A | W | H | F | P | L | I | E | F | S | P | G | Q | Q | L | P | Q | L | A | D | Q | L | A | A | L | G | E | S | D | L | L | F | A | L | S | Q | H | A | V | A | F | A | Q | S | Q | L | H | Q | Q | D | R | K | W | P | R | L | P | D | Y | F |
Query Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |   |
|
Template Sequence |   |
I | E | L | L | P | G | V | K | E | T | L | K | T | L | K | E | T | G | K | Y | K | L | V | V | A | T | K | G | D | L | . |
. |
L | D | Q | E | N | K | L | E | R | S | G | L | S | P | Y | F | D | H | I | E | V | X | S | D | K | T | E | K | E | Y | L | R | L | L | S | I | L | Q | I | . |
. |
. |
A | P | S | E | L | L |
Template Known Secondary structure |   |
|
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | S |
|  | . | . |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G |
| S |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . |
| G | G | G |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
170 | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | |
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|  |  |  |  | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | G | R | T | T | A | . |
. |
. |
L | A | L | H | T | V | S | G | Q | K | I | L | Y | P | Q | D |
Query Conservation |   |
|
|
|   |   |
|
| . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |
|   |   |   |
Template Sequence |   |
X | V | G | N | S | F | K | S | D | I | Q | P | V | L | S | L | G | G | Y | G | V | H | I | P | F | E |
Template Known Secondary structure |   |
 |  |  | S |
|
|
|
|
|
|  |  |  |  |  |  | T |
|  |  |  |  |
|
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|