Job Description P09126 Confidence 33.25% Date Thu Jan 5 11:01:52 GMT 2012 Rank 173 Aligned Residues 184 % Identity 12% Template c3bblA_ PDB info PDB header:regulatory protein Chain: A: PDB Molecule:regulatory protein of laci family; PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans Resolution 2.35 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	.	.	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R	L	P	D	Y	F	A	I	G	R	T
Query Conservation																																								.	.
Alig confidence																					.	.	.	.	.															.	.																								.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		S	S	X	V	R	E	A	G	A	V	N	Y	F	V	L	P	F	P	F	.	.	.	.	.	S	E	D	R	S	Q	I	D	I	Y	R	D	L	I	R	S	G	N	V	D	G	F	V	L	S	S	I	N	Y	N	D	P	R	V	Q	F	L	L	K	.	.	.	.	.	.	Q	K	F	P	F	V	A	F	G	R	S
Template Known Secondary structure											T	T									.	.	.	.	.		S	S	T	T											T	T			S						S			T	T										.	.	.	.	.	.	T	T							S
Template Predicted Secondary structure																					.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	.	.	.	.	.	.	.	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.													.																																.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.													.
Template Sequence		.	.	.	.	.	.	N	P	D	W	D	F	A	W	V	D	I	D	.	G	T	A	G	T	R	Q	A	V	E	Y	L	I	G	R	G	H	R	R	I	A	I	L	A	W	P	E	D	S	R	V	G	N	D	R	L	Q	G	Y	L	E	A	X	Q	T	A	Q	L	P	I	E	T	G	Y	I	L	R	G	E	G	T
Template Known Secondary structure		.	.	.	.	.	.	S	T	T										.																T											T	T																		T	T					G	G	G						S	S
Template Predicted Secondary structure		.	.	.	.	.	.													.
Template SS confidence
								156	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	.	.	.	.	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	S
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.																											.
Template Conservation																																															.
Template Sequence		F	E	V	G	R	A	X	T	L	H	L	L	D	L	S	P	E	R	R	P	T	A	I	X	T	L	N	D	T	X	A	I	G	A	X	A	A	A	R	E	R	G	L	T	I	.	G	T	D	L	A	I	I	G	F	D
Template Known Secondary structure														T	S		T	T	T	S		S					S	S														T	T			B	.	T	T	T	B						S
Template Predicted Secondary structure																																															.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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