Job Description P09126 Confidence 26.82% Date Thu Jan 5 11:01:52 GMT 2012 Rank 207 Aligned Residues 96 % Identity 14% Template c3b2nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:uncharacterized protein q99uf4; PDBTitle: crystal structure of dna-binding response regulator, luxr family, from2 staphylococcus aureus Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		R	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	.	.	.	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V
Query Conservation																																																		.	.	.
Alig confidence														.	.	.	.	.	.	.																														.	.	.																		.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Sequence		R	Q	A	M	V	Q	L	I	K	L	H	G	.	.	.	.	.	.	.	D	F	E	I	L	A	D	T	D	N	G	L	D	A	M	K	L	I	E	E	Y	N	P	N	V	V	I	L	D	I	E	M	P	G	M	T	G	L	E	V	L	A	E	I	R	K	K	H	L	.	.	.	.	.	N	I	K	V	I	I	V
Template Known Secondary structure													S	.	.	.	.	.	.	.	S								S															S						S	S		S	S	S												T	T		.	.	.	.	.	S
Template Predicted Secondary structure														.	.	.	.	.	.	.																																																		.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.	80	.	.	.
		215					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		S	.	.	.	.	E	R	L	A	K	L	A	R	E	L	G	W	Q	D	I	K	V	A	D	N	A	D	N	D	A	L	L	R	A	L	Q
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.															.
Template Conservation																					.
Template Sequence		T	T	F	K	R	P	G	Y	F	E	K	A	V	V	N	D	V	D	A	.	Y	V	L	K	E	R	S	I	E	E	L	V	E	T	I	N
Template Known Secondary structure			S													T	T		S		.				T	T	S
Template Predicted Secondary structure																					.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions