Return to main results Retrieve Phyre Job Id

Job DescriptionP09126
Confidence57.66%DateThu Jan 5 11:01:52 GMT 2012
Rank93Aligned Residues107
% Identity17%Templatec3a0rB_
PDB info PDB header:transferaseChain: B: PDB Molecule:response regulator; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360)
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130........ .140.........150.........160.........170.........180.... .....190.........200.
Predicted Secondary structure 







.














...



Query SS confidence 












.













































. . .
















Query Sequence  GKRALILRGNGGR. ELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVV. . . TSGEMLQQLWSLIPQWY
Query Conservation     

   
    .  
   
   
  
     
               
     
 
 
...

   
           
Alig confidence 












.

















.........


















...
















Template Conservation   








      
   
   
  
    .........    
   
     
 

 
       
      
    
Template Sequence  XKRILVVDDEPNIRELLKEELQEEGYEIDTAE. . . . . . . . . NGEEALKKFFSGNYDLVILDIEXPGISGLEVAGEIRKKK
Template Known Secondary structure 


S
T

.........STS

S

SS
SSS

Template Predicted Secondary structure 








.........

















Template SS confidence 















































































   1........10.........20.........30.. .......40.........50.........60.........70.
 
   202.......210.........220.........230...... ...240......
Predicted Secondary structure 











.


Query SS confidence 


































.









Query Sequence  REHWLLHCRLLVVSERLAKLARELGWQDIKVADNA. DNDALLRALQ
Query Conservation      
    




  

  
   
     

  
.    

 

 
Alig confidence 
.....




























.









Template Conservation   .....   

  
            
    
 

     
   
 
Template Sequence  K. . . . . DAKIILLTAYSHYRSDXSSWAADEYVVKSFNFDELKEKVK
Template Known Secondary structure  T.....T



SS
SS

SGGGGTS



SS

TT
Template Predicted Secondary structure 
.....













Template SS confidence 













































   72 .......80.........90.........100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions