Job Description P09126 Confidence 22.93% Date Thu Jan 5 11:01:52 GMT 2012 Rank 237 Aligned Residues 201 % Identity 13% Template c2xdqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		S	P	A	G	E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	.	D	R	K	W	P	R	L	P	D	Y	F	A	I
Query Conservation																																																																				.
Alig confidence																									.	.	.	.	.						.	.	.																															.													.
Template Conservation																									.	.	.	.	.						.	.	.																																												.
Template Sequence		Q	H	D	C	R	E	L	K	Q	L	M	A	D	L	G	I	Q	V	N	L	V	I	P	.	.	.	.	.	A	A	A	T	V	.	.	.	H	D	L	Q	R	L	P	Q	A	W	F	N	L	V	P	Y	R	E	I	G	G	L	T	A	Q	Y	L	E	R	E	F	G	Q	P	S	V	R	I	T	P	M	G	V	.
Template Known Secondary structure																T									.	.	.	.	.	T	T			T	.	.	.	T	T	G	G	G	G	G	G	S	S							T	T	S	S																						S		.
Template Predicted Secondary structure																									.	.	.	.	.						.	.	.																																												.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		G	R	T	T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	G	D	T	L	.	T	A	R	G	A	E	V	T
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence		.																																		.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation		.
Template Sequence		.	V	E	T	A	R	C	I	R	A	I	Q	G	V	L	N	A	Q	G	A	G	V	N	Y	E	A	F	I	E	Q	Q	T	R	E	V	S	Q	A	A	W	F	S	R	S	I	D	C	Q	N	L	T	G	K	K	A	V	V	F	G	D	N	T	H	A	A	A	M	T	K	I	L	S	R	E	M	G	I	H	V	V
Template Known Secondary structure		.																T	T	T																T									S					T	T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	E	C	Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	S	E	R	L	A	K	L	A	R	E	L	G	W	Q	D	I	K	V	A
Query Conservation
Alig confidence							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		W	A	G	T	Y	.	.	.	.	C	K	Y	D	A	D	W	F	R	A	E	V	A	G	F	C	D	E	V	L	I	T	D	D	H	T	V	V	G	D	A	I	A	R	V	.	.	.	.	.	.	.	.	.	.	E	P	A	A	I	F	G	T	Q	M	E	R	H	V	G	K	R	L	N	I	P	C	G	V	I	A
Template Known Secondary structure						S	.	.	.	.		G	G	G									T	T	T	S	S																			.	.	.	.	.	.	.	.	.	.			S																T							S
Template Predicted Secondary structure							.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		329	330	.	.	.					.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.											.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions