Job Description P09126 Confidence 54.23% Date Thu Jan 5 11:01:52 GMT 2012 Rank 101 Aligned Residues 202 % Identity 12% Template c2xdqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:light-independent protochlorophyllide reductase subunit n; PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	P	A	G	E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R	L	P	D	Y	F	A	I
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template Sequence		P	D	P	V	V	T	Q	L	T	L	E	L	K	K	Q	G	I	K	V	S	G	W	L	P	A	K	R	Y	.	.	.	.	.	.	.	.	.	T	E	L	P	V	I	D	E	G	Y	Y	V	A	G	V	N	P	F	L	S	R	T	A	T	T	L	I	R	R	R	K	C	.	.	.	.	.	.	Q	L	I	T	A
Template Known Secondary structure														G	G	G	T								S		S	S	G	.	.	.	.	.	.	.	.	.	G	G						T	T						S	S	T	T											T	T			.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.										.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270
		88						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																		.	.	.																																					.	.
Query SS confidence			.	.	.	.	.																																		.	.	.																																					.	.
Query Sequence		G	.	.	.	.	.	R	T	T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	.	.	.	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	.	.
Query Conservation			.	.	.	.	.																																		.	.	.																																					.	.
Alig confidence			.	.	.	.	.																																		.	.	.																																					.	.
Template Conservation
Template Sequence		P	F	P	I	G	P	D	G	T	R	T	W	I	E	Q	I	C	A	T	F	G	I	Q	P	Q	G	L	A	E	R	E	A	E	T	W	Q	K	L	S	D	Y	L	E	L	V	R	G	K	S	V	F	F	M	G	D	N	L	L	E	I	S	L	A	R	F	L	I	R	C	G	M	R	V	L	E	I	G	I	P	Y
Template Known Secondary structure				S	B																T	T					S											T	T								T	T									S	S												T	T									S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	C	A	I	H	Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	S	E	R	L	A	K	L	A	R	E	L	G	W	Q	D	I	K
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		M	D	K	R	Y	Q	A	A	E	L	A	L	L	S	Q	T	C	A	E	M	G	H	P	L	P	T	I	V	E	K	P	D	N	Y	N	Q	L	Q	R	I	K	A	L	Q	P	D	.	.	.	.	.	.	.	L	V	I	T	G	M	A	H	A	N	P	L	E	A	R	G	I	S	T	K	W
Template Known Secondary structure																					T	T									S																S	.	.	.	.	.	.	.														T	B	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.								.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions