Job Description P09126 Confidence 20.65% Date Thu Jan 5 11:01:52 GMT 2012 Rank 255 Aligned Residues 212 % Identity 10% Template c2x7xA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: fructose binding periplasmic domain of hybrid two component2 system bt1754 Resolution 2.64 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																					.	.									.	.
Query SS confidence																																					.	.									.	.
Query Sequence		V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	.	.	G	E	S	D	L	L	F	A	.	.	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R	L	P	D	Y	F	A	I	G	R	T	T
Query Conservation																																					.	.									.	.
Alig confidence																		.	.	.	.	.															.	.									.	.																.	.	.	.	.	.												.
Template Conservation																		.	.	.	.	.																																										.	.	.	.	.	.												.
Template Sequence		R	E	A	M	F	Y	N	G	V	S	V	E	I	R	S	A	.	.	.	.	.	G	D	D	N	S	K	Q	A	E	D	V	H	Y	F	M	D	E	G	V	D	L	L	I	I	S	A	N	E	A	A	P	M	T	P	I	V	E	E	A	Y	Q	.	.	.	.	.	.	K	G	I	P	V	I	L	V	D	R	K	.
Template Known Secondary structure					T	T	S	S	S									.	.	.	.	.	T	T															T	T		S							S	S														.	.	.	.	.	.	T	T							S	S		.
Template Predicted Secondary structure																		.	.	.	.	.																																										.	.	.	.	.	.												.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	.	.	.	.	.	.	.	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R	C	A	I	H
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence		.	.	.																																																.	.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	L	S	D	K	Y	T	A	Y	I	G	A	D	N	Y	E	I	G	R	S	V	G	N	Y	I	A	S	S	L	K	G	K	G	N	I	V	E	L	T	G	L	S	G	S	T	P	A	M	E	R	H	Q	G	F	M	A	A	I	S	K	F	P	D	I	K	L	I	D	K	A	D	A	A	W	E	R	G
Template Known Secondary structure		.	.	.		S	S	S		S	S																						T	T	T									S		T	T	S																T		T											T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																																					.	.										.	.
Query SS confidence																.																																					.	.										.	.
Query Sequence		Y	D	G	A	E	E	A	M	R	W	Q	A	R	E	.	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	.	.	S	E	R	L	A	K	L	A	R	.	.	E	L	G	W	Q	D	I	K	V	A	D	N	A	D	N	D
Query Conservation																.																																					.	.										.	.
Alig confidence																.																											.	.	.								.	.										.	.
Template Conservation																																											.	.	.
Template Sequence		P	A	E	I	E	M	D	S	M	L	R	R	H	P	K	I	D	A	V	Y	A	H	N	D	R	I	A	P	G	A	Y	Q	A	A	K	M	A	G	R	E	K	.	.	.	E	M	I	F	V	G	I	D	A	L	P	G	K	G	N	G	L	E	L	V	L	D	S	V	L	D	A	T	F	I	Y	P	T	N	G	D
Template Known Secondary structure															S								S	S	T	T												T	T		T	T	.	.	.	S	S										S	T	T	S							T	T	S		S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	R	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	V	L	Q	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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