Job Description P09126 Confidence 47.93% Date Thu Jan 5 11:01:52 GMT 2012 Rank 117 Aligned Residues 184 % Identity 14% Template c2rgyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of transcriptional regulator of laci family from2 burkhoderia phymatum Resolution 2.05 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	.	.	.	.	.	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R	L	P	D	Y	F	A	I
Query Conservation																																								.	.	.	.	.
Alig confidence																					.	.	.	.	.															.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																					.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		K	Q	T	D	L	E	L	R	A	V	H	R	H	V	V	V	A	T	G	.	.	.	.	.	C	G	E	S	T	P	R	E	Q	A	L	E	A	V	R	F	L	I	G	R	D	C	D	G	V	V	V	I	S	H	D	L	H	D	E	D	L	D	E	L	H	R	.	.	.	.	.	.	X	H	P	K	X	V	F	L
Template Known Secondary structure											T	T									.	.	.	.	.		S	S	S																T	T		S							S	S	S											.	.	.	.	.	.			S	S
Template Predicted Secondary structure																					.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140								.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																							.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.
Query Sequence		G	R	T	T	A	L	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	E	L	Q	N	I	A	G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	.	.	.	.	.	.	.	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R
Query Conservation																																																							.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.													.																																.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.													.
Template Sequence		N	R	A	.	.	.	.	.	.	F	D	A	L	P	D	A	S	F	C	P	D	.	H	R	R	G	G	E	L	A	A	A	T	L	I	E	H	G	H	R	K	L	A	V	I	S	G	P	F	T	A	S	D	N	V	E	R	L	D	G	F	F	D	E	L	A	R	H	G	I	A	R	D	S	V	P	L	I	E	S
Template Known Secondary structure		S	S		.	.	.	.	.	.		T	T	S	G	G	G						.															T	T			S						S		T	T																	T	T	T			G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.													.
Template SS confidence
		174	.	.							.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		C	A	I	H	Y	D	G	A	E	E	A	M	R	W	.	.	Q	A	R	E	V	T	M	V	V	V	T	S	G	E	M	L	Q	Q	L	W	S	L	I	P	Q	W	Y	R	E	H	W	L	L	H	C	R	L	L	V	V	S
Query Conservation																.	.
Alig confidence																.	.																															.
Template Conservation																																																.
Template Sequence		D	F	S	P	E	G	G	Y	A	A	T	C	Q	L	L	E	S	K	A	P	F	T	G	L	F	C	A	N	D	T	X	A	V	S	A	L	A	R	F	Q	Q	L	G	I	S	V	.	P	G	D	V	S	V	I	G	Y	D
Template Known Secondary structure			S	S															T				S					S	S														T	T			T	.	T	T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions