Return to main results Retrieve Phyre Job Id

Job DescriptionP09126
Confidence24.05%DateThu Jan 5 11:01:52 GMT 2012
Rank223Aligned Residues86
% Identity13%Templatec2q9uB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60. ........70.........80....
Predicted Secondary structure 














.......






Query SS confidence 

















































. . . . . . .






















Query Sequence  GEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQ. . . . . . . HAVAFAQSQLHQQDRKWPRLPDY
Query Conservation     
   
   
      
 
   
             
   
 




 ....... 

      
             
Alig confidence 



















.......






















.......






















Template Conservation 
  

  
   
  
     .......       
   
   
 

 




 
         
  
       

   
Template Sequence  ALALLDGARSTGCETVLLEM. . . . . . . TSSDITKVALHTYDSGAVAFASPTLNNTMMPSVAAALNYVRGLTLIKGKPAFA
Template Known Secondary structure  TT
G.......GG


S

TT
TTTTTSB
Template Predicted Secondary structure 



.......
























Template SS confidence 















































































   274.....280.........290... ......300.........310.........320.........330.........340......
 
   85... .90.........100....
Predicted Secondary structure 
.......






Query SS confidence 



. . . . . . .















Query Sequence  FAIG. . . . . . . RTTALALHTVSGQKIL
Query Conservation   


.......  

  
   
     
Alig confidence 



.......















Template Conservation 
 
 
    
       
   
   
 
Template Sequence  FGAFGWSNRAVPDIVAELRDGCKADVY
Template Known Secondary structure  SSS

TS

B

Template Predicted Secondary structure 







Template SS confidence 


























   347..350.........360.........370...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions