|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | I | L | V | T | R | P | S | P | A | G | E | E | L | V | S | R | L | R | T | L | G | Q | V | A | W | H | F | P | L | I | E | F | S | P | G | Q | Q | L | P | Q | L | A | D | Q | L | A | A | L | G | E | S | D | L | L | F | A | L | S | Q | H | A | V | A | F | A | Q | S | Q | L | H | Q | Q | D | R | K | W | P | R |
Query Conservation |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |   |   |
|   | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
M | K | V | F | V | T | R | R | I | P | A | . |
E | G | R | V | A | L | A | R | A | A | D | C | E | V | E | Q | W | D | . |
. |
. |
. |
. |
. |
S | D | E | P | I | P | A | K | E | L | E | R | G | V | A | G | A | H | G | L | L | C | L | L | S | D | H | V | D | . |
. |
. |
. |
. |
. |
K | R | I | L | D | A | A | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |
| S |
|
|
|  | . |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |
|
| . | . | . | . | . | . | S | S | S |
|
|
|  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |  |
| T | T | S |
| B |
| . | . | . | . | . | . |  |  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 70 | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
120 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|  |  |  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
L | P | D | Y | F | A | I | G | R | T | T | . |
. |
. |
. |
. |
A | L | A | L | H | T | V | S | G | Q | K | I | L | Y | P | Q | D | R | E | I | S | E | V | L | L | Q | L | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | Q | N | I |
Query Conservation |   |
  |   |   |   |   |
|
|
|   |   |
| . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   | . | . |
|   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
N | L | K | V | I | S | T | M | S | V | G | I | D | H | L | A | L | D | E | I | K | K | R | G | I | R | V | G | Y | T | P | . |
. |
D | V | L | T | D | T | T | A | E | L | A | V | S | L | L | L | T | T | C | R | R | L | P | E | A | I | E | E | V | K | N | G | G | W | T | S | W | K | P | L | W | L | C | G | Y | G | L |
Template Known Secondary structure |   |
T |
|
|  |  |  |  | S | S | S |
|
| T | T | B |
|  |  |  |  |  |  | T | T |
|  |  |  |
|
|
| . | . | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |
|
| T | T | S | S |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | K | R | A | L | I | L | R | G | N | G | G | R | E | L | I | G | D | T | L | T | A | R | G | A | E | V | T | F | C | E | C | Y | Q | R | C | A |
Query Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | Q | S | T | V | G | I | I | G | L | G | R | I | G | Q | A | I | A | R | R | L | K | P | F | G | V | Q | R | F | L | Y | T | G | R | Q | P | R | P |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | G | G | G | T |
|
|  |  |  |  |  | S | S | S |
|
|  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . |
  |