Job Description P09126 Confidence 37.35% Date Thu Jan 5 11:01:52 GMT 2012 Rank 155 Aligned Residues 142 % Identity 12% Template c1gdhA_ PDB info PDB header:oxidoreductase(choh (d)-nad(p)+ (a)) Chain: A: PDB Molecule:d-glycerate dehydrogenase; PDBTitle: crystal structure of a nad-dependent d-glycerate2 dehydrogenase at 2.4 angstroms resolution Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		S	I	L	V	T	R	P	S	P	A	G	E	E	L	V	S	R	L	R	T	L	G	Q	V	A	W	H	F	P	L	I	E	F	S	P	G	Q	Q	L	P	Q	L	A	D	Q	L	A	A	L	G	E	S	D	L	L	F	A	L	S	Q	H	A	V	.	A	F	A	Q	S	Q	L	H	Q	Q	D	R	K	W	P	R
Query Conservation																																																																	.
Alig confidence											.	.												.							.	.	.	.	.	.																													.										.	.	.	.	.	.
Template Conservation											.	.												.							.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		K	I	L	I	T	W	P	L	P	.	.	E	A	A	M	A	R	A	R	E	S	Y	.	D	V	I	A	H	G	.	.	.	.	.	.	D	D	P	K	I	T	I	D	E	M	I	E	T	A	K	S	V	D	A	L	L	I	T	L	N	E	K	C	R	K	E	V	I	D	R	I	P	E	.	.	.	.	.	.	N
Template Known Secondary structure						S	S				.	.									T	T	S	.							.	.	.	.	.	.	S	T	T												T	T		S						T	T	S		B								S		T	.	.	.	.	.	.	T
Template Predicted Secondary structure											.	.												.							.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.
		81	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																																120	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	D	Y	F	A	I	G	R	T	T	A	L	.	.	.	.	A	L	H	T	V	S	G	Q	K	I	L	Y	P	Q	D	R	E	I	S	E	V	L	L	Q	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	Q	N	I	A
Query Conservation															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.														.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		I	K	C	I	S	T	Y	S	I	G	F	D	H	I	D	L	D	A	C	K	A	R	G	I	K	V	G	N	A	P	.	.	H	G	V	T	V	A	T	A	E	I	A	M	L	L	L	L	G	S	A	R	R	A	G	E	G	E	K	M	I	R	T	R	S	W	P	G	W	E	P	L	E	L	V	G	E	K	L	D
Template Known Secondary structure									S	S			T	T	B								T	T								.	.		S																		T	T										T	T							T	T	T	T						T
Template Predicted Secondary structure																																.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	A	L	I	L	R	G	N	G	G	R	E	L	I	G	D	T	L	T	A	R	G	A	E	V	T	F	C	E	C	Y	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	T	L	G	I	Y	G	F	G	S	I	G	Q	A	L	A	K	R	A	Q	G	F	D	M	D	I	D	Y	F	D	T	H	R	A
Template Known Secondary structure		T									S												T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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