Return to main results Retrieve Phyre Job Id

Job DescriptionP77453
Confidence9.19%DateThu Jan 5 12:29:24 GMT 2012
Rank18Aligned Residues20
% Identity25%Templatec2f3iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna-directed rna polymerases i, ii, and iii 17.1 PDBTitle: solution structure of a subunit of rna polymerase ii
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.......
Predicted Secondary structure 




Query SS confidence 



















Query Sequence  HLLDEIVQEPAIYLMARKIA
Query Conservation    
  
  









  
Alig confidence 



















Template Conservation    
     
  






  
Template Sequence  NNLHGFEVDSRVYLLMKKLA
Template Known Secondary structure  T

STTSTTS

Template Predicted Secondary structure 








Template SS confidence 



















   130.........140.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions