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Job DescriptionP15877
Confidence42.46%DateThu Jan 5 11:34:57 GMT 2012
Rank90Aligned Residues321
% Identity15%Templated1ri6a_
SCOP info7-bladed beta-propeller Putative isomerase YbhE Putative isomerase YbhE
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   294.....300......... 310.........320.........330.........340.........350.........360.........370..
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Query Sequence  VNDGRLIAINAENGKL. CETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNT
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Template Sequence  SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP. . . . DKRYLYVGVRPE. . . . . . . . FRVLAYRIAP
Template Known Secondary structure 

GGGT
TTS

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T....TSSTTT........T
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   2.......10.........20.........30.........40....... ..50......... 60.........
 
   373......380.........390.........400.........410.........420.........430.........440.........450..
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Query Sequence  GELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGK
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Template Conservation                   ...............                  .................             
Template Sequence  DDGALTFAAESALPGSL. . . . . . . . . . . . . . . THISTDHQGQFVFVGSYN. . . . . . . . . . . . . . . . . AGNVSVTRLEDGL
Template Known Secondary structure  TT


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TTSSTT.................TTTT
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   70.........80...... ...90.........100.... .....110.......
 
   453......460.........470.........480.........490.........500.........510.........520.........530..
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Query Sequence  LAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPF
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Template Conservation                         .........                                                
Template Sequence  PVGVVDVVEGLDGCHSANISPDN. . . . . . . . . RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN
Template Known Secondary structure 


TTB



TTS.........SGGGT
TTS

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   118.120.........130.........140 .........150.........160.........170.........180........
 
   533......540.........550.........560.........570.........580.........590.........600.........610..
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Query Sequence  SELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALP
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Template Conservation                 
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Template Sequence  EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP. . . . . . . . . . . . . . . ENFSDTRWAADIHITPDGRHLYACDRTAS
Template Known Secondary structure  SSTTTTSS
TTS


S
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   189190.........200.........210.........220.... .....230.........240.........250...
 
   613......620.........630.........640.........650.........660.........670.........680.........690..
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Query Sequence  FVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQ
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Template Sequence  LIT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VFSVSEDGSVLSKEGFQ. . . .
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   693......700.........710.........720.........730...... ...740. ........750.....
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Query Sequence  DSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAY. . NMSNG. . EKLWQGRLPAGGQA
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Template Sequence  . . . . . . . . . . . . . PTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMW
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SSS



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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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