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Job DescriptionP15877
Confidence100.00%DateThu Jan 5 11:34:57 GMT 2012
Rank9Aligned Residues524
% Identity28%Templated1lrwa_
SCOP info8-bladed beta-propeller Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180.........190.........200.........210.........220.........230. ......
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Query Sequence  AISPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCT. AHQRLF
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Template Sequence  VELAKDPANWVMTGRDYNAQNYSEMTDINKENVKQLRPAWSFSTGV. . . . . . . . LHGHEGTPLVVGDRMFIHTPFPNTTF
Template Known Secondary structure  TSTT
B
STTSSTT





SS
TTTGGG
S
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S


S

TT

STTT
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   5....10.........20.........30.........40.........50 .........60.........70......
 
   238.240... ......250.........260.... .....270.........280.........290.........300.........310...
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Query Sequence  ALDAAS. GKEKWHYDPELKTNESFQHVT. . . CRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLCETF
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Template Sequence  ALDLNEPGKILWQNKPKQNPTARTVACCDVVNRGLAYWPG. . . . . . . . . DDQVKPLIFRTQLDGHIVAMDAETGETRWIM
Template Known Secondary structure  TTSTTS




GGGGGG
SS
S






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SSS


TTSTTT

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   77..80.........90.........100.........110...... ...120.........130.........140.......
 
   314.....320.........330.........340.........350.........360.........370.........380.........390.
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Query Sequence  ANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPS. .
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Template Sequence  ENS. . . . . . . . . . . DIKVGSTLTIAPYVIKDLVLVGSSGAELGV. . . . RGYVTAYDVKSGEMRWRAFATGPDEELLLAED
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GGGT
B

S

TT

B
GGGT
....

TTT

SSS
TB
TT
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   148.150 .........160.........170.........180 .........190.........200.........210..
 
   392.......400.........410.........420.........430.........440.........450...
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Query Sequence  . . . . . . . . . . . . . . . . . . DEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKL
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Template Sequence  FNAPNPHYGQKNLGLETWEGDAWKIGGGTNWGWYAYDPEVDLFYYGSGNPAP. . WNETMRPGDNKWTMAIWGREATTGEA
Template Known Secondary structure  TT
S
GGG

TTTSSTTGGGG





S

TTTT



S
..S
GGGS
S

TTTTTTT

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   213......220.........230.........240.........250.........260.... .....270.........280.........290
 
   454.....460.........470......... 480.........490.........500.........510.........520.........530..
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Query Sequence  AWSYQTVHHDLWDMDLPAQPTLADIT. VNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPF
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Template Sequence  KFAYQKTPHDEWDYAGVNVMMLSEQEDKQGQMRKLLTHPDRNGIVYTLDRTNGDLISADKMDDTV. . . . . . NWVKEVQLD
Template Known Secondary structure  SSTT
SS








TTS

TTSTTTTSSTT
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TT
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   291........300.........310.........320.........330.........340.........350..... ....360....
 
   533......540.........550.........560.........570.........580.........590.........600.........610..
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Query Sequence  SELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALP
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Template Conservation           .............................                 
       
  
    
     
  
Template Sequence  TGLPVRDPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . FGTRMDHKARDICPSAMGYHNQGHDSYDPERKVFMLGINHIC
Template Known Secondary structure  T


GG.............................G


TT

SS
TT
SS
S
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TTTT
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   365....370... ......380.........390.........400.........410.....
 
   613......620.........630.........640.........650.........660.........670.........680.........690..
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Query Sequence  FVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQ
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Template Sequence  MDWEPFMLPYRAGQFF. . . . . . . . . . . . . . . . . . . . VGATLTMYPGPKGDRGNASGLGQIKAYDAISGEMKWEK. . . . . .
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TTS

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TTSBTTTTB

TTTT......
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   416...420.........430. ........440.........450.........460.........
 
   693......700.........710.........720.........730.........740.........750.........760.........770..
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Query Sequence  DSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISA
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Template Sequence  . . . . . . . . . . . . . MERFSVWGGTMATAGGLTF. YATLDGFIKARDSDTGDLLWKFKLPSGVIGHPMTYKHDGRQYVAIMY
Template Known Secondary structure  .............SS


SBTTT.
TTSTTT


SS


S

TT
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   470.........480........ .490.........500.........510.........520.........530.....
 
   773......780 .........790.
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Query Sequence  GGHGSFGT. . . . . . . . . . . . . . . . . . . . . . . . . . KMGDYIVAYAL
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Template Conservation                                      
      
 
Template Sequence  GVGGWPGVGLVFDLADPTAGLGSVGAFKRLQEFTQMGGGVMVFSL
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TT


TTTTTGGGT




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   536...540.........550.........560.........570.........580
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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