Return to main results Retrieve Phyre Job Id

Job DescriptionP15877
Confidence100.00%DateThu Jan 5 11:34:57 GMT 2012
Rank5Aligned Residues525
% Identity25%Templated1flga_
SCOP info8-bladed beta-propeller Quinoprotein alcohol dehydrogenase-like Quinoprotein alcohol dehydrogenase-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  ISPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFAL
Query Conservation         

   

     




 

   

  
  

   

               






 


 
    
 

Alig confidence 












































......




























Template Conservation          
            
    
   

  
   
      ......       
 
 
  
 


      
 

Template Sequence  NDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGD. . . . . . EKQRGQESQAIVSDGVIYVTASYSRLFAL
Template Known Secondary structure  TGGG
TT
B
STTSSTT





SS
TTTGGG


T......T

S





TTTTT
Template Predicted Secondary structure 

































......















Template SS confidence 















































































   10.........20.........30.........40.........50.... .....60.........70.........80...
 
   240.........250....... ..260.........270.........280.........290.........300.........310........
Predicted Secondary structure 










.






































Query SS confidence 

















.




























































Query Sequence  DAASGKEKWHYDPELKTN. ESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGV
Query Conservation 

 


 

         .        



              
    

   
 

 
 



 

   
 
   
 
Alig confidence 

















.















...............



























..
Template Conservation 
  

  

                          ............... 
   
 

 
 


  

   
     ..
Template Sequence  DAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGD. . . . . . . . . . . . . . . KVFFGTLDASVVALNKNTGKVVWKKKFA. .
Template Known Secondary structure  SSS





TT


SS
S




TT...............TTTSSS


S..
Template Predicted Secondary structure 























...............











..
Template SS confidence 















































































   84.....90.........100.........110........ .120.........130.........140......
 
   319320.........330.........340.........350..... ....360.........370.........380......
Predicted Secondary structure 





















..

















..........
Query SS confidence 




































. .






























. . . . . . . . . .
Query Sequence  LNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDN. . FSTRETSGVIRGFDVNTGELLWAFDPGAKDP. . . . . . . . . .
Query Conservation 
 
              



 
  
 



    
 ..       
 
 
 

 

   
      
  ..........
Alig confidence  .........



























..






























..........
Template Conservation  .........           
               
         
 
 
 
  

  

                   
Template Sequence  . . . . . . . . . DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTV
Template Known Secondary structure  .........
GGGT
B

S


TTT



B
GGG

B

TTT

SSTT
TT
Template Predicted Secondary structure  .........











































Template SS confidence 















































































   147..150.........160.........170.........180.........190.........200.........210.......
 
   387..390.........400.........410.........420..... ....430.........440.......
Predicted Secondary structure  .............




























......
















Query SS confidence  . . . . . . . . . . . . .






































. . . . . .





















Query Sequence  . . . . . . . . . . . . . NAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTP. . . . . . DIWGGNRTPEQERYASSILALN
Query Conservation  .............      
     

  

   
 
   



  


  
......
  
  
 
 

    





Alig confidence  .............






































......





















Template Conservation                            
       
 
   
 
   
                            
 


Template Sequence  TGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVD
Template Known Secondary structure  SS
TT
TTS
B
TTSTTSB
GGGGG
B



S

TTTT

BSSS
GGGGS
TTS
STT


TT
S
Template Predicted Secondary structure 















































Template SS confidence 















































































   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   448.450.........460.........470......... 480.........490.........500.........510........ .520....
Predicted Secondary structure 




















.


















..





Query SS confidence 































.






































. .





Query Sequence  ATTGKLAWSYQTVHHDLWDMDLPAQPTLADIT. VNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQ. . GAAKGD
Query Conservation    

   
  
    
 

 
    
 
 
  . 

     
    
 
  




 

  
    
  

 ..    

Alig confidence 































.






































..





Template Conservation    

   
       
  
      
 
       
     
      
 
  
    
                     
Template Sequence  PSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLK
Template Known Secondary structure  TTT

SSTT

S








SSS

TTSTTT

SSS


S
TT
Template Predicted Secondary structure 
















































Template SS confidence 















































































   298.300.........310.........320.........330.........340.........350.........360.........370.......
 
   525....530.........540.........550.........560.........570.........580.........590.........600....
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  YVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVA
Query Conservation      


    
          
 
  
  
              
  


        

  

 

   
 

     
Alig confidence 
















...............................































Template Conservation                   ...............................           
   
       
        
Template Sequence  TGRPVEREGQRPPLPEP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLF
Template Known Secondary structure  T


TT
S




T...............................T
SS


SS
TT
SS
SS


TTT

Template Predicted Secondary structure 











...............................




















Template SS confidence 















































































   378.380.........390.... .....400.........410.........420......
 
   605....610.........620.........630.........640.........650.........660.........670.........680....
Predicted Secondary structure 




























































Query SS confidence 















































































Query Sequence  IANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVW
Query Conservation 

          
                            
 

           
 
   

 
 
 


  



 
Alig confidence 



























..........................

























Template Conservation                      
       ..........................           
 
 
 
  

   
Template Sequence  YVPANHWKEDYWTEEVSYTKGSAYLGMG. . . . . . . . . . . . . . . . . . . . . . . . . . FRIKRMYDDHVGSLRAMDPVSGKVVW
Template Known Secondary structure 






TTS



..........................S
SS
S
TTT

Template Predicted Secondary structure 
















..........................











Template SS confidence 















































































   427..430.........440.........450.... .....460.........470.........480
 
   685....690.........700.........710.........720.........730.........740.........750.........760....
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  KKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNG
Query Conservation    
 
      
           
 
  

 
 






  

 

 


 

 


 

   

    
 
 

   
Alig confidence 

...................


















.






































Template Conservation    ...................           
 


 

. 
  

 
 
 
  

  

           
      
Template Sequence  EH. . . . . . . . . . . . . . . . . . . KEHLPLWAGVLATAGNLVF. TGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDG
Template Known Secondary structure  ...................SS


S

TTT.
TTSTTT


SS


S

TT
Template Predicted Secondary structure  ...................











.

















Template SS confidence 















































































   481. .......490.........500. ........510.........520.........530.........540
 
   765....770........ .780.........790...
Predicted Secondary structure 





............








Query SS confidence 













. . . . . . . . . . . .














Query Sequence  KQYVVISAGGHGSF. . . . . . . . . . . . GTKMGDYIVAYALPD
Query Conservation 



 
  

    ............    

   




 
Alig confidence 













............














Template Conservation   


    
                           
 
  
Template Sequence  EQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLPS
Template Known Secondary structure 


S
TTT







Template Predicted Secondary structure 



























Template SS confidence 








































   541........550.........560.........570.........580.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions