Job Description P15877 Confidence 25.59% Date Thu Jan 5 11:34:57 GMT 2012 Rank 118 Aligned Residues 108 % Identity 17% Template c3odtB_ PDB info PDB header:nuclear protein Chain: B: PDB Molecule:protein doa1; PDBTitle: crystal structure of wd40 beta propeller domain of doa1 Resolution 1.35 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	G	D	T	L	Y	L	C	T	A	H	Q	R	L	F	A	L	D	A	A	S	G	K	E	K	W	H	Y	D	P	E	L	K	T	N	E	S	F	Q	H	V	T	C	R	G	V	S	Y	H	E	A	K	A	E	T	A	S	P	E	V	M	A	D	C	P	R	R	I	I	L	P	V	N	D	G	R	L	I
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	D	D	G	H	F	I	S	C	S	N	D	G	L	I	K	L	V	D	X	H	T	G	D	V	L	R	T	Y	E	G	H	E	S	F	V	Y	C	I	K	L	L	P	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	S	C	G	E	D	R	T	V	R
Template Known Secondary structure					T	T							T	T	S							T	T	T											S	S									T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.																							.	.	.	.	.	.	.	240	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	N	A	E	N	G	K	L	C	E	T	F	A	N	K	G	V	L	N	L	Q	S	N	M	P	D	T	K	P	G	L	Y	E	P	T	S	P	P	I	I	T	D	K	T	I	V	M	A	G	S	V	T	D	N	F	S	T	R	E	T	S	G	V	I	R	G	F	D	V	N	T	G	E	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.	.	.	.	.
Template Sequence		I	W	S	K	E	N	G	S	L	K	Q	V	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	S	I	W	S	V	D	C	X	S	.	.	.	N	G	D	I	I	V	G	S	S	.	.	.	.	.	.	.	.	.	.	D	N	L	V	R	I	F	S	Q	E	K	S	R	W
Template Known Secondary structure					T	T	T		S								.	.	.	.	.	.	.	.	.	.	.	.	S	S	S									T	.	.	.	T	S							T	.	.	.	.	.	.	.	.	.	.	T	S							S		G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.													260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280											.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions