Job Description P15877 Confidence 98.45% Date Thu Jan 5 11:34:57 GMT 2012 Rank 30 Aligned Residues 200 % Identity 14% Template c3nokB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glutaminyl cyclase; PDBTitle: crystal structure of myxococcus xanthus glutaminyl cyclase Resolution 1.65 Å

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		221	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	K	V	G	D	T	L	Y	L	C	T	A	.	H	Q	R	L	F	A	L	D	A	A	S	G	K	E	K	W	H	Y	D	P	E	L	K	T	N	E	S	F	Q	H	V	T	C	R	G	V	S	Y	H	E	A	K	A	E	T	A	S	P	E	V	M	A	D	C	P	R	R	I	I	L	P	V	N	D	G	R	L
Query Conservation														.
Alig confidence														.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	H	Q	G	H	F	F	E	S	T	G	H	Q	G	T	L	R	Q	L	S	L	E	S	A	Q	P	V	W	M	E	R	L	G	N	I	F	A	E	G	L	A	S	D	G	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	Q	L	T	W	T	E	G	L	L
Template Known Secondary structure					T	T							T	T	T	T							S	S		S	S		S						T	T										S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																							.	.	.	.	100	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	N	A	E	N	G	K	L	C	E	T	F	A	N	K	G	V	L	N	L	Q	S	N	M	P	D	T	K	P	G	L	Y	E	P	T	S	P	P	I	I	T	D	K	T	I	V	M	A	G	S	V	T	D	N	F	S	T	R	E	T	S	G	V	I	R	G	F	D	V	N	T	G	E	L	L	W	A	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	W	S	G	M	P	P	Q	R	E	R	T	T	R	Y	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	W	G	L	C	Y	W	N	G	K	L	V	R	S	D	G	.	.	.	.	.	.	.	.	.	.	G	T	M	L	T	F	H	E	P	D	G	F	A	L	V	G	A	V
Template Known Secondary structure						T	T	T	T									S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T							S	.	.	.	.	.	.	.	.	.	.	S	S							T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.											.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	G	A	K	D	P	N	A	I	P	S	D	E	H	T	F	T	F	N	S	P	N	S	W	A	P	A	A	Y	D	A	K	L	D	L	V	Y	L	P	M	G	V	T	T	P	D	I	W	G	G	N	R	T	P	E	Q	E	R	Y	A	S	S	I	L	A	L	N	A	T	T	G	K	L	A	W	S	Y	Q	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	Q	P	V	E	L	I	N	E	L	E	C	A	N	G	V	I	Y	A	N	I	W	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	D	V	L	E	I	D	P	A	T	G	T	V	V	G	V	I	D	A
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T													T	T							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S							T	T	T		B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		460			.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		V	.	.	H	H	D	L	W	D	M	D	L	P	A	Q	P	T	L	A	D	I	T	V	N	G	Q	K	V	P	V	I	Y	A	P	A	K	T	G	N	I	F	V	L	D
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		S	A	L	T	R	A	V	A	G	Q	V	T	N	P	E	A	V	L	N	G	I	A	V	E	P	G	S	G	R	I	F	M	T	G	K	L	W	P	R	L	F	E	V	R
Template Known Secondary structure									T	T	T			S	T	T										T	T	T								T	T		S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions