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Job DescriptionP15877
Confidence83.23%DateThu Jan 5 11:34:57 GMT 2012
Rank63Aligned Residues223
% Identity12%Templatec3iytG_
PDB info PDB header:apoptosisChain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex
Resolution9.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   350.........360.........370.........380.........390.........400.........410.........420.........
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Query Sequence  GSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWG
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Template Sequence  SEDGQRIASCGADKTLQVFKAETGEKLLEI. . . . . . . . . . . . . . . . . . KAHEDEVLCCAFSTDDRFIATCSVD. . . . . . .
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   624.....630.........640.........650... ......660.........670........
 
   430.........440.........450.........460.........470.........480.........490.........500.........
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Query Sequence  GNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVV
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Template Sequence  . . . . . . . . . . . KKVKIWNSMTGELVHTYDEHSEQVNCCHFTN. . . . . . . . . . SSHHLLLATGSSDCFLKLWDLNQKECRN
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   679680.........690.........700......... 710.........720.........730.......
 
   510.........520.........530.........540.........550.........560.........570.........580.........
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Query Sequence  PAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGM
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Template Sequence  TMFGHTNSVNH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   738.740........
 
   590.........600.........610.........620.........630.........640.........650.........660.........
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Query Sequence  FEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAW
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Template Sequence  . . . . . CRFSPDDKLLASCSAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   749750.........760....
 
   670.........680.........690.........700.........710.........720.........730.........740.........
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Query Sequence  GYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRL
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Template Sequence  GTLKLWDATSANERKS. . . . . . . . . . . . . . . . . . . . . INVKQFFLNLEDPQERIM. . VAAKNKIFLFDIHTSGLLGEIHT
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   765....770.........780 .........790........ .800.........810.........820.
 
   750.........760.........770....
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Query Sequence  PAGGQATPMTYEVNGKQYVVISAGG
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Template Sequence  GHHSTIQYCDFSPQNHLAVVALSQY
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   838.840.........850.........860..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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