|   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
T | A | H | Q | R | L | F | A | L | D | A | A | S | G | K | E | K | W | H | Y | D | P | E | L | K | T | N | E | S | F | Q | H | V | T | C | R | G | V | S | Y | H | E | A | K | A | E | T | A | S | P | E | V | M | A | D | C | P | R | R | I | I | L | P | V | N | D | G | R | L | I | A | I | N | A | E | . |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|   |
|   |
|
|
|
|   | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |   | . |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
D | I | A | P | F | T | F | I | V | D | T | E | . |
G | E | Y | R | W | W | L | D | Q | D | T | F | Y | D | G | R | D | R | D | I | N | K | R | G | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | I | R | E | T | P | R | G | T | F | T | A | V | Q | G | Q | H | W | Y | E | F |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |
| T | T | . | S |
|  |  |  |  |
|
| G | G | G | T |
|
| S | S | S |
|
| G | G | G |
| S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | B | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | |
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |
  |   |
|
|
306 | . | . | . | 310 | . | . | . | . | . | |
. | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
N | G | K | L | C | E | T | F | A | N | . |
K | G | V | L | N | L | Q | S | N | M | P | D | T | K | P | G | L | Y | E | P | T | S | P | P | I | I | T | D | K | T | I | V | M | A | G | S | V | T | D | N | F | S | T | R | E | T | S | G | V | I | R | G | F | D | V | N | T | G | E | L | L | W | A | F | D | P | G |
Query Conservation |   |
. | . |
|
|   |   |   |
|   |
|   |   | . |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
| . |   |
|
|
|
|
|   |   |
|   |   |   |
Template Sequence |   |
D | M | M | G | Q | V | L | E | D | H | K | L | P | R | G | F | A | D | A | T | H | E | S | I | E | T | P | N | G | T | V | L | L | R | V | G | K | S | . |
. |
. |
. |
. |
. |
. |
. |
N | Y | R | R | D | D | G | V | H | V | T | T | I | R | D | H | I | L | E | V | D | . |
K | S | G | R | V | V | D | V | W | D | L | T |
Template Known Secondary structure |   |
| T | T |
|
|  |  |  |  |  |  |
|
| T | T |  |  |
| B |
| S |
|  |  |  |
| T | T | S |
|  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T |  |  |
| T | T | S |
|  |  |
|
|
| S |
|  |  |  |  |  |
| . | T | T | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
. | . | . | . | . | . | . | . | . | 300 | . | . |
  |
  |   |
383 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | |
|
|
. | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
| . | . | . |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | P | N | A | I | P | S | D | E | H | T | F | T | F | N | S | P | N | S | W | . |
. |
. |
A | P | A | A | Y | D | A | K | L | D | L | V | Y | L | P | M | G | V | T | T | P | D | I | W | G | G | N | R | T | P | E | Q |
Query Conservation |   |
  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
| . | . | . |   |   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
| . | . | . | . |
Template Conservation |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|   |
|
|   |   |   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . |   |
| . | . | . | . |
Template Sequence |   |
K | I | L | D | P | K | R | D | A | L | L | G | A | L | D | A | G | A | A | H | A | G | Q | Q | A | K | L | E | P | D | T | P | F | G | D | A | L | G | V | G | P | G | R | N | W | A | H | V | N | S | I | A | Y | D | A | K | D | D | S | I | I | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | R | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  | S |
| T | T |
|
| T | T | G | G | G | S | B | T | T |
|
|
|
| S |
| B |
|
|
|
| T | T |
|
| S | S | S | S | S |
| S | S | T | T | S |
| S |
|
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  | T | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
303 | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | |
|
|
|
  |
  |   |
437 | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 490 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | Y | A | S | S | I | L | A | L | N | A | T | T | G | K | L | A | W | S | Y | Q | T | V | H | H | D | L | W | D | M | D | L | P | A | Q | P | T | L | A | D | I | T | V | N | G | Q | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | P | V | I | Y | A | P | A | K | T | G | N | I |
Query Conservation |   |
|   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |
|   |
|   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |
|
|
|   |
|   | . |   |   |
|   |
|   |
|
| . | . |
|
|   |   |   |
|   |   |   |   |   | . |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
| . |   |   |   |   |   |
|   |
|
Template Sequence |   |
. |
. |
. |
H | Q | G | V | V | K | I | G | . |
R | D | K | Q | V | K | W | I | . |
. |
L | A | P | S | K | G | W | E | K | P | L | . |
A | S | K | L | L | K | P | V | D | A | N | G | K | P | I | T | C | N | E | N | G | L | C | E | N | S | D | F | D | F | T | Y | T | Q | H | T | A | . |
W | I | S | S | K | G | T | L |
Template Known Secondary structure |   |
. | . | . | T | T |  |  |  |  |  |  | . | T | T | S |
|  |  |  |  | . | . |  | S |
| S | T | T |
|
| T | T | G | . | G | G | G | B |
|  |  | B |
| T | T | S |
| B |
|
| B |
| T | T | S |
| B | S | S | S | S |
|
|
|
| S | S |
|  |  |  | . |  |  |
| T | T | S |
|  |
Template Predicted Secondary structure |   |
. | . | . |
|
|  |  |  |  |  |
| . |
|
|
|
|  |  |  |  | . | . |  |
|
|
|
|
|
|
|
|  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
375 | . | . | . | . | 380 | . | . | |
. | . | . | . | . | . | . | 390 | |
|
. | . | . | . | . | . | . | . | . | 400 | . | |
. | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . | . | . | . | . |
  |
  |   |
498 | . | 500 | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
F | V | L | D |
Query Conservation |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|
|
Template Sequence |   |
T | I | F | D |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
447 | . | . | 450 |
  |