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Job DescriptionP15877
Confidence98.23%DateThu Jan 5 11:34:57 GMT 2012
Rank31Aligned Residues257
% Identity12%Templatec3dsmA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein bacuni_02894; PDBTitle: crystal structure of the surface layer protein bacuni_02894 from2 bacteroides uniformis, northeast structural genomics consortium3 target btr193d.
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IKVGDTLYLCTAH. QRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRL
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Template Sequence  VIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG. . . . . . . . . FTSPRYIHFLSD. . . . . . . . . . . . . EKAYVTQIWDYRI
Template Known Secondary structure  TTGGGTTTT


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SST.............TBS
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Query Sequence  IAINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAF
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Template Sequence  FIINPKTYEITGYIECP. . . . . . . . . . . DXDXESGSTEQXVQYGKYVYVNCWSYQN. . . . . . . . RILKIDTETDKVVDEL
Template Known Secondary structure  TTTT
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Query Sequence  DPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERY. . . . . . . ASSILALNATTGK
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Template Sequence  TIGIQPTSLVXDKYNKXWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWR
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Query Sequence  LAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAP. . AKTGNIFVLDRRNGELVVPAPEKPVPQG
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Template Sequence  XPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS. PQGKLIDEFYVGIIPGA
Template Known Secondary structure  TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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