Job Description P15877 Confidence 85.47% Date Thu Jan 5 11:34:57 GMT 2012 Rank 62 Aligned Residues 205 % Identity 11% Template c2wg3C_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:hedgehog-interacting protein; PDBTitle: crystal structure of the complex between human hedgehog-2 interacting protein hip and desert hedgehog without calcium Resolution 2.60 Å

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		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		M	A	D	C	P	R	R	I	I	L	P	V	N	D	G	R	L	I	A	I	N	A	E	N	G	K	L	C	E	T	F	A	N	K	G	V	L	N	L	Q	S	N	M	P	D	T	K	P	G	L	Y	E	P	T	S	P	P	I	I	T	.	D	K	T	I	V	M	A	G	S	V	T	D	N	F	S	T	R	E	T
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		S	G	D	G	S	Q	R	L	F	I	L	E	K	E	G	Y	V	K	I	L	T	P	E	G	E	I	F	K	E	P	Y	L	D	I	H	K	L	V	Q	S	G	I	K	G	G	D	E	R	G	L	L	S	L	A	F	H	P	N	Y	K	K	N	G	K	L	Y	V	S	Y	T	T	N	Q	E	R	W	A	I	G	P
Template Known Secondary structure			S	S	S	S								T	T	T							T	T	S		B		S	S		S				T	T	T	B					S	S	S				S								T	T																	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		S	G	V	I	R	G	F	D	V	N	T	G	E	L	L	W	A	F	D	P	G	A	K	D	P	N	A	I	P	S	D	E	H	T	F	T	F	N	S	P	N	S	W	A	.	.	.	P	A	A	Y	D	A	K	L	D	L	V	Y	L	P	M	G	V	T	T	P	D	I	W	G	G	N	R	T	P	E	Q	E	R
Query Conservation																																														.	.	.
Alig confidence										.	.	.	.	.	.																															.	.	.								.
Template Conservation										.	.	.	.	.	.																																									.
Template Sequence		H	D	H	I	L	R	V	V	.	.	.	.	.	.	E	Y	T	V	S	R	K	N	P	H	Q	V	D	L	R	T	A	R	V	F	L	E	V	A	E	L	H	R	K	H	L	G	G	Q	L	L	F	G	P	D	.	G	F	L	Y	I	I	L	G	D	G	M	I	T	L	D	D	M	E	E	M	D	G	L	S	D
Template Known Secondary structure		S								.	.	.	.	.	.				B		T	T		T	T	S	B		G	G	G										S	S	S	S	S									T	T	.	S									T	T										T	T			S
Template Predicted Secondary structure										.	.	.	.	.	.																																									.
Template SS confidence
		315	.	.	.	.	320	.	.							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	S	I	L	A	L	N	A	T	T	G	K	L	A	W	S	Y	Q	T	V	H	H	D	L	W	D	M	D	L	P	A	Q	P	T	L	A	D	I	T	V	N	G	Q	K	V	P	V	I	Y	A	P	A	K	T	G	N	I	F	V	L	D	R	R	N	G	E
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	G	S	V	L	R	L	D	V	D	T	D	M	C	N	V	P	Y	S	I	P	R	S	N	P	H	.	.	.	.	.	.	.	.	.	.	.	.	F	N	S	T	N	Q	P	P	E	V	F	A	H	G	L	H	D	P	G	R	C	A	V	D	R	H	P	T	D
Template Known Secondary structure			T	T						B						S	S		S		B			T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S	S		T	T							S	S			B					S	S		S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.													.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions