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Job DescriptionP15877
Confidence97.11%DateThu Jan 5 11:34:57 GMT 2012
Rank41Aligned Residues277
% Identity13%Templatec1qniE_
PDB info PDB header:oxidoreductaseChain: E: PDB Molecule:nitrous-oxide reductase; PDBTitle: crystal structure of nitrous oxide reductase from2 pseudomonas nautica, at 2.4a resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   356...360.........370.........380.........390... ......400.........410.........420...
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Query Sequence  FSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDE. . . . . . . . . . . . HTFTFNSPNSWAPAAYDAKLDLVYLPMGVT
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Template Sequence  FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFIN. . . .
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   23......30.........40.........50.........60.........70.........80.........90........
 
   424.....430.........440.........450.........460.........470.........480.........490..
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Query Sequence  TPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPA. . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . DKANTRVARIRLDIMKTDKITHIP. . . . . . . . NVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD
Template Known Secondary structure  .............TTTTTTTT
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   99100.........110.........120.. .......130.........140.........150.......
 
   493......500.........510.........520.........530.........540.........550.........560.......
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Query Sequence  . . . . . KTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMR
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Template Sequence  FSLDNSYTMFTAIDAETMDVAWQVIVDGNLDN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGTTT

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   158.160.........170.........180.........
 
   568.570.........580.........590.........600.........610.........620.........630.........640.......
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Query Sequence  YEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . TDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKT
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SSSSS
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   190.........200.........210.........220.........230.........240..
 
   648.650.........660.........670.........680. ........690.........700.........710.........720......
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Query Sequence  PYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNE. VVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIA
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Template Sequence  IGDSK. . . . . . . . . . . . . . . . . . . VPVVDGRGESEFTRYIPVPKNP. . . . . . . . . . . . . . . . . . . HGLNTSPDGKYFIAN
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   243.... ..250.........260......... 270.........280....
 
   727..730.........740..... ....750........ .760.........770
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Query Sequence  ATADNYLRAYNMSNGEKLW. . QGRLPAGGQATPM. . . . . . . . TYEVNGKQYVVI
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Template Sequence  GKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTL
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TTSSBGGGTTTSS
GGGG

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   285....290.........300.........310.........320.........330........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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