Return to main results Retrieve Phyre Job Id

Job DescriptionP71242
Confidence92.18%DateThu Jan 5 12:12:37 GMT 2012
Rank47Aligned Residues381
% Identity12%Templated2acva1
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL
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Template Sequence  SELIFIPAPGI. . . GHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLK
Template Known Secondary structure 

SST...TTT
TT


TT




S
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GGGGG
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   10.........20 .........30.........40.........50.........60.........70.........80......
 
   81........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHS. . .
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Template Sequence  SPEFYILTFLESLIP. . . . . . . . . . . HVKATIKTILSNKVVGLVLD. . . . . . . . FFCVSMIDVGNEFGIPSYLFLTSNVG
Template Known Secondary structure  ST...........

TT........GGGGGGTT

SS
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   87..90.........100. ........110.........120. ........130.........140.......
 
   158.160.........170.........180.... ...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VGPFQDEQFNQLANYVFGHCDALILRE. . . . . SVS
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Template Sequence  FLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSS
Template Known Secondary structure  GGGS
TT




SSGGG


TT
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GGGS

TTTTTSSS

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   148.150.........160.........170.........180.........190.........200.........210.........220.......
 
   188.190.........200.........210. ........220.........230.........240.........250.........260.....
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Query Sequence  FDLMKRSNITTAKVEHGVDTAWLV. . DHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGV
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Template Sequence  IDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGP. . . . . . . . . SQIREI
Template Known Secondary structure 
TTS







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BTTB
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   228.230.........240.........250.........260.........270.........280.........290.. ......
 
   266...270.........280.........290.........300.........310.........320.........330.........340. ...
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Query Sequence  VNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAII. SMN
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Template Sequence  ALGLKHSGVRFLWS. . . . . . . . NSAEKKVFPEGFLEWMELEGKGMICGWA. . PQVEVLAHKAIGGFVSHCGWNSILESMW
Template Known Secondary structure  T
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GGGS
TT
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STT


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   299300.........310.. .......320.........330.........340 .........350.........360........
 
   345....350.... .....360.. .......370...... ...380.........390.........400.........
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Query Sequence  FATPAIAINY. . . EHKSAGIM. QQLGLPEMAIDIRH. . . . . LLDGSLQAMVADTLGQLPALNARLSEAVSRERQ. . . . . .
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Template Sequence  FGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGG
Template Known Secondary structure  TT




STTTS

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TT




T
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   369370.........380.........390.........400.........410.........420.........430.........440........
 
   410.........420..
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Query Sequence  TGMQMVQSVLERI
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Template Sequence  SSLISVGKLIDDI
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   449450.........460.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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