Job Description P71242 Confidence 99.54% Date Thu Jan 5 12:12:37 GMT 2012 Rank 1 Aligned Residues 318 % Identity 16% Template d1pswa_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase ADP-heptose LPS heptosyltransferase II Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K	V	L
Query Conservation
Alig confidence									.	.	.																																.																																		.	.	.	.	.
Template Conservation									.	.	.																																.																																		.	.	.	.	.
Template Sequence		X	K	I	L	V	I	G	.	.	.	P	S	W	V	G	D	X	X	X	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	X	A	P	.	A	W	C	R	P	L	L	S	R	X	P	E	V	N	E	A	I	P	X	E	I	G	E	R	R	K	L	G	H	S	L	R	E	.	.	.	.	.
Template Known Secondary structure									.	.	.		S	S																		S	T	T									.	G	G	G					T	T		T	T																			T	T	T	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																																.																																		.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V	G	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	.	.	.	.	.	.	.	.	.	.	L	V	P	L	F	A	G	I	P	H	R	T	.	.	.	.	.	G	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S						S			S	G	G	G	.	.	.	.	.	.	.	.	.	.						T	T		S				.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
																																					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.						.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K	T	V	A	I	T
Query Conservation
Alig confidence																																											.	.
Template Conservation																																											.	.
Template Sequence		R	G	E	X	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	L	X	V	E	R	Y	I	A	L	A	Y	D	K	G	I	X	R	T	A	Q	.	.	D	L	P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	X	I	G	F	C
Template Known Secondary structure			T	T	T		T	T	T		T							T	T	T			S								T	T	S		G	G	G		S	S	G	G	.	.	G	S		S	S																				T	T			S	S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	.	.	A	R	Y	H	V	V	M	D	E	L	N	D
Query Conservation																																																																				.	.
Alig confidence															.	.	.	.	.	.																					.	.	.	.	.	.	.	.																				.	.
Template Conservation															.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		P	G	A	E	F	G	P	A	K	R	W	P	H	.	.	.	.	.	.	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	G	Y	Q	V	V	L	F	.	.	.	.	.	.	.	.	G	S	A	K	D	H	E	A	G	N	E	I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L
Template Known Secondary structure					T	T		G	G	G	S				.	.	.	.	.	.													T	T							.	.	.	.	.	.	.	.			G	G	G									T	T	S						T	T					T	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.									220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.											.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	M	G	K	I	L	G	A	C	E	L	T	V	G	T	R	L	H	S	A	I	I	S	M	N	F	A	T	P	A	I	A	I	N	Y	E	H	K	S	A	G	I	M	Q	Q	L	G	L	P	E	M	A	I	D	.	.	.	.	.	.	.	.	.	.	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.
Template Sequence		D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G	L	X	H	V	A	A	A	L	N	R	P	L	V	A	L	.	Y	G	P	S	S	P	D	F	T	P	P	L	S	H	K	A	R	V	I	R	L	I	T	G	E	G	Y	H	Q	S	L	I	D	I	T	P	Q	R	V	L	E	E	L	N	A
Template Known Secondary structure										T	S	S						S	S									T	T							.		S	S	S		T	T	S	S					T	T						S	S											T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		389	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	G	Q	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	L	Q	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		342	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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