Job Description P71242 Confidence 81.81% Date Thu Jan 5 12:12:37 GMT 2012 Rank 70 Aligned Residues 341 % Identity 10% Template d1f0ka_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Peptidoglycan biosynthesis glycosyltransferase MurG Resolution 1.90

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	I	L	G	N	H	T	C	G	N	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K	V	L	R
Query Conservation
Alig confidence									.				.	.																	.	.
Template Conservation									.				.	.																	.	.
Template Sequence		R	L	M	V	M	A	G	.	G	T	G	.	.	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	.	.	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	I	E	I	D	F	I	R	I	S	G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I	F
Template Known Secondary structure									.	S	S		.	.															T	T	.	.	T									T	T	S	T					G	G	G	G	T												T	T								T
Template Predicted Secondary structure									.				.	.																	.	.
Template SS confidence
		8	.	10	.	.	.	.		.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V	G	P	F
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		N	A	W	R	Q	A	R	A	I	M	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	P	D	V	V	L	G	M	G	G	.	.	.	.	.	.	.	.	Y	V	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	G
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S						S	S	.	.	.	.	.	.	.	.	T	T											T	T									S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.																							.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K	T	V	A	I	T	L
Query Conservation
Alig confidence			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P	V	R	V	L	V	V	G
Template Known Secondary structure			.	.	.	.	.	.						T	T	T		S					S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														T	S								T	T			S	S
Template Predicted Secondary structure			.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V	M	D	E	L	N	D	L	E	M
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.																																.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.																																.	.	.
Template Sequence		G	S	Q	G	A	.	.	.	.	.	.	.	.	.	.	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I	W	H	Q	.	.	.	.	.	.	.	.	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	.	.	.
Template Known Secondary structure		T	T	T			.	.	.	.	.	.	.	.	.	.															G	G	G							.	.	.	.	.	.	.	.			T	T												T	T		T	T	S				S			S				.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.																																.	.	.
Template SS confidence
		191	.	.	.	.											.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																				.														.	.	.														.	.
Query SS confidence																				.														.	.	.														.	.
Query Sequence		G	K	I	L	G	A	C	E	L	T	V	G	T	R	L	H	S	A	.	I	I	S	M	N	F	A	T	P	A	I	A	I	.	.	.	N	Y	E	H	K	S	A	G	I	M	Q	Q	L	.	.	G	L	P	E	M	A	I	D	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D	T	L	G	Q	L	P	A
Query Conservation																				.														.	.	.														.	.
Alig confidence		.																		.														.	.	.														.	.																									.	.	.
Template Conservation		.																																																																										.	.	.
Template Sequence		.	A	A	Y	A	W	A	D	V	V	V	C	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	.	.	S	R	E
Template Known Secondary structure		.							S																		T											T	T													T	T	S						G	G	G												T		.	.	.
Template Predicted Secondary structure		.																																																																										.	.	.
Template SS confidence
			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	N	A	R	L	S	E	A	V	S	R	E	.	R	Q	T	G	M	Q	M	V	Q	S	V	L	E	R	I	G	E
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		T	L	L	T	M	A	E	R	A	R	A	A	S	I	P	D	A	T	E	R	V	A	N	E	V	S	R	V	A	R
Template Known Secondary structure													T			T	T														T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions