Job Description P71242 Confidence 79.84% Date Thu Jan 5 12:12:37 GMT 2012 Rank 75 Aligned Residues 283 % Identity 11% Template c3s29C_ PDB info PDB header:transferase Chain: C: PDB Molecule:sucrose synthase 1; PDBTitle: the crystal structure of sucrose synthase-1 from arabidopsis thaliana2 and its functional implications. Resolution 2.85 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																							.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																							.
Query Sequence		S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	Q	D	E	Q	F	N	.	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																							.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																							.
Template Conservation
Template Sequence		D	L	I	I	G	N	Y	S	D	G	N	L	V	A	S	L	L	A	H	K	L	G	V	T	Q	C	T	I	A	H	A	L	E	K	T	K	Y	P	D	S	D	I	Y	W	K	K	L	D	D	K	Y	H	F	S	C	Q	F	T	A	D	I	F	A	M	N	H	T	D	F	I	I	T	S	T	F	Q	E	I	A	G
Template Known Secondary structure		S																					T								S							S	T	T	T	T	T	T																								S	S					S		S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
																							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.																.	.	.	.	230
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	V	.	.	.	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	W	L	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	E	T	V	G	Q	Y	E	S	H	T	A	F	T	L	P	G	L	Y	R	V	V	H	G	I	D	V	F	D	P	K	F	N	I	V	S	P	G	A	D	M	S	I	Y	F	P	Y	T	E	E	K	R	R	L	T	K	F	H	S	E	I	E	E	L	L	Y	S	D	V	E	N	K	E	H	L	C	V	L	K
Template Known Secondary structure			S	S	S			T	T	G	G	G	S	S				T	T	T									T	T		T	T										T	T	T				T	T		T	T	T	S		G	G	G											S			S	S	S			S		B	S
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		A	A	Q	Q	K	T	V	A	I	T	L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	.	.	.	.	.	M	V	A	L	N	L	R	Q	H	I	S	D
Query Conservation																																																																	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	K	K	P	I	L	F	T	M	A	R	.	.	.	.	.	.	.	.	.	.	L	D	R	V	K	N	L	S	G	L	V	E	W	Y	G	K	N	T	R	L	R	E	L	A	N	L	V	V	V	G	G	D	R	R	K	E	S	K	D	N	E	E	K	A	E	M	K	K	M	Y	D	L	I	E	E	Y	K	L
Template Known Secondary structure			T	T	S									.	.	.	.	.	.	.	.	.	.		S	T	T	T	T																											T	T	S																					T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		569	570	.	.	.	.	.	.	.	.	.	580											.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.
Predicted Secondary structure																									.	.	.	.										.	.	.	.	.																													.	.
Query SS confidence																									.	.	.	.										.	.	.	.	.																													.	.
Query Sequence		P	A	R	Y	H	V	V	M	D	E	L	N	D	L	E	M	G	K	I	L	G	A	C	.	.	.	.	E	L	T	V	G	T	R	L	H	.	.	.	.	.	S	A	I	I	S	M	N	F	A	T	P	A	I	A	I	N	Y	E	H	K	S	A	G	I	M	Q	Q	L	.	.	G	L	P	E	M	A	I	D	I
Query Conservation																									.	.	.	.										.	.	.	.	.																													.	.
Alig confidence																									.	.	.	.										.	.	.	.	.																			.	.	.	.							.	.
Template Conservation																																																													.	.	.	.
Template Sequence		N	G	Q	F	R	W	I	S	S	Q	M	D	R	V	R	N	G	E	L	Y	R	Y	I	C	D	T	K	G	A	F	V	Q	P	A	L	Y	E	A	F	G	L	T	V	V	E	A	M	T	C	G	L	P	T	F	A	T	C	K	G	.	.	.	.	G	P	A	E	I	I	V	H	G	K	S	G	F	H	I	D	P
Template Known Secondary structure		T	B	T																							T	T								S		B	S	S											T							S	S	B	.	.	.	.	T							B	T	T	T	B					T
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.					.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																				.
Query SS confidence																		.	.	.	.																				.
Query Sequence		R	H	L	L	D	G	S	L	Q	A	M	V	A	D	T	L	.	.	.	.	G	Q	L	P	A	L	N	A	R	L	S	E	A	V	S	R	E	R	Q	.	T	G	M	Q	M	V	Q	S	V	L	E	R	I	G	E	V
Query Conservation																		.	.	.	.																				.
Alig confidence			.	.														.	.	.	.																				.
Template Conservation			.	.
Template Sequence		Y	.	.	H	G	D	Q	A	A	D	T	L	A	D	F	F	T	K	C	K	E	D	P	S	H	W	D	E	I	S	K	G	G	L	Q	R	I	E	E	K	Y	T	W	Q	I	Y	S	Q	R	L	L	T	L	T	G	V
Template Known Secondary structure		T	.	.	S																			T
Template Predicted Secondary structure			.	.
Template SS confidence
		715			.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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