Job Description P71242 Confidence 85.88% Date Thu Jan 5 12:12:37 GMT 2012 Rank 59 Aligned Residues 116 % Identity 20% Template c3lcmB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K	V	L
Query Conservation
Alig confidence																															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	I	L	I	V	Y	T	H	P	N	P	T	S	F	N	A	E	I	L	K	Q	V	Q	T	N	L	S	K	.	.	.	E	H	T	V	S	T	L	D	L	Y	A	E	H	F	D	P	V	L	Q	F	N	E	T	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S		T	T	S													S		T	.	.	.	T	S							T	T	T	T	T								S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.															.	.
Predicted Secondary structure																																																								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	.	V	P	Q	F	E	H	A	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F
Query Conservation																																																								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	R	D	L	A	K	V	A	E	M	E	K	Y	R	D	L	V	T	W	A	D	H	L	I	F	I	F	P	I	W	W	S	G	M	P	A	I	L	K	G	F	I	D	R	V	F	V	A	D	F	A	Y	S	Y	K	K	V	G	L	E	G	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	G		G	G	G											S									B	T	T	B													S		B	T	T	T					S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	K	K	P	L	F	M	I	G	H	S	V	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	K	S	A	W	I	I	T	T	H	N	T	P
Template Known Secondary structure			T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions