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Job DescriptionP71242
Confidence80.42%DateThu Jan 5 12:12:37 GMT 2012
Rank73Aligned Residues131
% Identity12%Templatec2zkiH_
PDB info PDB header:transcriptionChain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL
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Template Sequence  PNILVLFYG. YGSI. . VELAKEIGKGAEEA. . GAEVKIRRVRETLPPEFQSRIPFDKVKD. . . . . . . . . . . . . . . . . . . .
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   81........90.........100.........110.........120.........130.... .....140.........150....
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Query Sequence  RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYG. . . . . . VPQFEHALCTFMAKKPLFMI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . IPEVTLDDMRWADGFAIGSPTRYGNMAGGLKTFLDTTAILWKDNVLYGKPVTFF
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   60.........70.........80.........90.........100.........110...
 
   155....160. ........170.........180..
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Query Sequence  GHSVGPF. QDEQFNQLANYVFGHCDALIL
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Template Sequence  TEASTVHGGHETTILTMSTYAYHFGMIIV
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BSSTTSSSSTT

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   114.....120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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