Job Description P71242 Confidence 93.04% Date Thu Jan 5 12:12:37 GMT 2012 Rank 45 Aligned Residues 326 % Identity 9% Template c2x0dA_ PDB info PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	.	.	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		K	R	L	N	L	L	V	P	S	I	N	Q	E	H	X	F	G	G	I	S	T	A	L	K	L	F	E	Q	F	D	N	K	K	F	K	K	R	I	I	L	T	D	A	T	P	N	P	K	D	L	Q	S	F	K	S	F	K	Y	V	X	P	E	E	D	K	D	F	A	L	Q	I	V	P	F	N	D	R	Y	N	R
Template Known Secondary structure									S				G	G	G		S											T	T	S		T	T	T								S	S									G	G	G	T	T	S					T	T						S							S			T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	H	D	I	F	I	A	T	A	W	W	T	A	Y	A	A	Q	R	I	V	S	W	Q	S	D	T	Y	G	I	P	P	N	K	I	L	Y	I	I	Q	D	F	E
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S																			T												S		G
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130																																		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		G	P	F	Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	.	.	.	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K
Query Conservation																		.	.	.
Alig confidence																		.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	F	Y	Q	W	S	S	Q	Y	V	L	A	E	S	T	Y	K	Y	R	G	P	Q	I	A	V	F	N	S	E	L	L	K	Q	Y	F	N	N	K	G	Y	N	F	T	D	E	Y	F	F	Q	P	K	I	.	.	.	.	.	.	.	.	.	.	.	N	T	T	L	K	N	Y	I	N	D	K	R	Q	K	E	K
Template Known Secondary structure		G	G	G	S		S	S									T	T	S			S								S											T				S										.	.	.	.	.	.	.	.	.	.	.						T	T	T	T	S						S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.												.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	I	T	L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V	M	D	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	L	V	Y	G	R	P	S	V	.	.	.	.	.	.	.	.	K	R	N	A	F	T	L	I	V	E	A	L	K	I	F	V	Q	K	Y	D	R	S	N	E	W	K	I	I	S	V	G	E	K	H	K	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	L	G	K	G	I	H	L	N	S	L	G	K
Template Known Secondary structure									T	T		.	.	.	.	.	.	.	.	G	G	G																	T	T	G	G	G								S							.	.	.	.	.	.	.	.	.	.	.	.			T	T								S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.									.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290													.	.	.	.	.	.	.	.	.	300	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.						.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		L	N	D	L	E	M	G	K	I	L	G	A	C	E	L	T	V	G	T	R	L	H	.	.	.	.	.	S	A	I	I	S	M	N	F	A	T	P	A	I	A	I	N	Y	E	H	K	S	A	G	I	M	Q	Q	L	G	L	P	E	M	A	I	D	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D	T	L
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																							.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		L	T	L	E	D	Y	A	D	L	L	K	R	S	S	I	G	I	S	L	X	I	S	P	H	P	S	Y	P	P	L	E	X	A	H	F	G	L	R	V	I	T	N	K	Y	E	N	K	D	L	.	.	.	.	.	S	N	W	H	S	N	I	V	S	L	E	Q	L	N	P	E	N	I	A	E	T	L	V	E	L	C
Template Known Secondary structure																						S	S	S	S			S								T	T								B	T	T	B		G	.	.	.	.	.	G	G	T	B	T	T					S	S		S
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		391	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	L	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	S	F	N	E
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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