Job Description P71242 Confidence 94.18% Date Thu Jan 5 12:12:37 GMT 2012 Rank 37 Aligned Residues 199 % Identity 14% Template c2vsnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation Resolution 2.75 Å

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		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K	T	V	A	I	T	L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		H	V	L	R	L	Q	G	A	F	Q	P	S	D	T	S	R	V	V	A	E	P	P	S	R	T	Q	C	G	L	P	E	Q	G	V	V	L	C	C	F	N	N	S	Y	K	L	N	P	.	.	.	.	.	.	.	.	.	.	.	Q	S	M	A	R	M	L	A	V	L	R	E	V	P	D	S	V	L	W	L	.	.
Template Known Secondary structure							S	S		S					T	T									T	G	G	G	T			S	S	S									G	G	G				.	.	.	.	.	.	.	.	.	.	.													S	T	T						.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.												.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																																																					.	.	.	.																						.	.	.	.
Query SS confidence																																																					.	.	.	.																						.	.	.	.
Query Sequence		C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V	M	D	E	L	N	D	L	E	M	G	K	I	L	G	A	C	E	L	T	V	.	.	.	.	G	T	R	L	H	S	A	I	I	S	M	N	F	A	T	P	A	I	A	I	N	.	.	.	.
Query Conservation																																																					.	.	.	.																						.	.	.	.
Alig confidence		.	.	.	.																																																.	.	.	.																						.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	L	S	G	P	G	E	A	D	A	R	L	R	A	F	A	H	A	Q	G	V	D	A	Q	R	L	V	F	M	P	K	L	P	H	P	Q	Y	L	A	R	Y	R	H	A	D	L	F	L	D	T	H	P	Y	N	A	H	T	T	A	S	D	A	L	W	T	G	C	P	V	L	T	T	P	G	E	T	F
Template Known Secondary structure		.	.	.	.				S	T	T												T	T	S		G	G	G																G	G	G		S						S	S	S			S										T					B				S	S	G
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		Y	E	H	K	S	A	G	I	M	Q	Q	L	G	L	P	E	M	A	I	D	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D	T	L	G	Q	L	P	A	L	N	A	R	L	S	E	A	V	S	R	E	R	Q	T	G	.	.	.	.	M	Q	M	V	Q	S	V	L	E	R	I
Query Conservation																																																												.	.	.	.
Alig confidence																						.	.	.	.																	.																		.	.	.	.
Template Conservation																						.	.	.	.																	.
Template Sequence		A	A	R	V	A	G	S	L	N	H	H	L	G	L	D	E	M	N	V	A	.	.	.	.	D	D	A	A	F	V	A	K	A	V	A	L	A	S	D	P	.	A	A	L	T	A	L	H	A	R	V	D	V	L	R	R	A	S	G	V	F	H	M	D	G	F	A	D	D	F	G	A	L
Template Known Secondary structure		G	G	S										T		G	G	G	B		S	.	.	.	.	S																.																	S	G	G	G
Template Predicted Secondary structure																						.	.	.	.																	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.					.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.		.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions