Job Description P71242 Confidence 98.07% Date Thu Jan 5 12:12:37 GMT 2012 Rank 19 Aligned Residues 384 % Identity 10% Template c2r60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.													.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	.	.	.	.	.	.	.	.	.	.	.	.	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																												.	.
Template Sequence		K	H	V	A	F	L	N	P	Q	G	N	F	D	P	A	D	S	Y	W	T	E	H	P	D	F	G	G	Q	L	V	Y	V	K	E	V	S	L	A	L	A	E	M	.	.	G	V	Q	V	D	I	I	T	R	R	I	K	D	E	N	W	P	E	F	S	G	E	I	D	Y	Y	Q	E	T	N	K	V	R	I	V	R
Template Known Secondary structure										S	S				T	T		T	T	T	T	S	B	T	T	B	S																T	.	.	T												B	T	T	B	G	G	G			S					T	T		S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	V	V	G	R	V	K	K	V	L	R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Sequence		I	P	F	G	G	D	K	F	L	P	K	E	E	L	W	P	Y	L	H	E	Y	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	I	I	N	F	Y	R	E	E	G	K	F	P	Q	V	V	T	T	H	Y	G	.	.	.	.	.	.	.	.	D	G	G	L	A	G	V	L	L	K	N	I	K	G
Template Known Secondary structure					S		S	S				G	G	G		G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	.	.											T				S								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.															.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.																				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		K	P	L	F	M	I	G	H	S	V	G	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	.	.	.	.	.	.	.	.	N	I	T	T	A	K	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	F	T	F	T	G	H	S	L	G	A	Q	K	M	E	K	L	N	V	N	T	S	N	F	K	E	M	D	E	R	F	K	F	H	R	R	I	I	A	E	R	L	T	M	S	Y	A	D	K	I	I	V	S	T	S	Q	E	R	F	G	Q	Y	S	H	D	L	Y	R	G	A	V	N	V	E	D	D	D	K	F
Template Known Secondary structure									S	S								T	T				S	T	T	S																								S					S	S							T	T	T	S	G	G	G	T	T	T			T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	.	.	.	.	.	.	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K	T	V	A	I	T	L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	I	P	P	G	V	N	T	R	V	F	D	G	E	Y	G	D	K	I	K	A	K	I	T	K	Y	L	E	R	D	L	G	S	E	R	M	E	L	P	A	I	I	A	S	.	.	.	.	.	.	.	.	.	.	S	R	L	D	Q	K	K	N	H	Y	G	L	V	E	A	Y	V	Q	N	K	E	L	Q	D	K
Template Known Secondary structure								B		T	T	T	S	S	S																		S		G	G	G	T	T	S							.	.	.	.	.	.	.	.	.	.	S				G	G	G											T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.											.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.											.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																											.	.	.																					.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																											.	.	.																					.	.	.	.	.
Query Sequence		V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	.	.	.	.	.	.	.	.	.	.	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V	M	D	E	L	N	.	.	.	D	L	E	M	G	K	I	L	G	A	C	E	L	T	V	G	T	R	L	H	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.																											.	.	.																					.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																											.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		A	N	L	V	L	T	L	R	G	I	E	N	P	F	E	D	Y	S	R	A	G	Q	E	E	K	E	I	L	G	K	I	I	E	L	I	D	N	N	D	C	R	G	K	V	S	M	F	P	L	N	S	Q	Q	E	L	A	G	C	Y	A	Y	L	A	S	K	G	S	V	F	A	L	T	S	F	Y	E	P	F	G	L
Template Known Secondary structure									S	S		S	B	T	T	T	B		T	T	S																		T	T		B	T	T								S														T	T								S		B				S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		S	A	I	I	S	M	N	F	A	T	P	A	I	A	I	N	Y	E	H	K	S	A	G	I	M	Q	Q	L	G	L	P	E	M	A	I	D	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D	T	L	G	Q	L	P	A	L	N	A	R	L	S	E	A	V	S	R	E	R	Q	T	.	G	M	Q	M	V	Q
Query Conservation																																																																											.
Alig confidence																				.	.	.	.																																																				.
Template Conservation																				.	.	.	.
Template Sequence		A	P	V	E	A	M	A	S	G	L	P	A	V	V	T	R	N	G	.	.	.	.	G	P	A	E	I	L	D	G	G	K	Y	G	V	L	V	D	P	E	D	P	E	D	I	A	R	G	L	L	K	A	F	E	S	E	E	T	W	S	A	Y	Q	E	K	G	K	Q	R	V	E	E	R	Y	T	W	Q	E	T	A
Template Known Secondary structure									T	T							S	S	B	.	.	.	.						T	G	G	G	T	S	S					T	T														S																				S	B
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		417	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	E	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	Y	L	E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.