Job Description P71242 Confidence 95.91% Date Thu Jan 5 12:12:37 GMT 2012 Rank 27 Aligned Residues 358 % Identity 11% Template c2p6pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K	V	L
Query Conservation
Alig confidence													.	.	.																	.	.
Template Conservation													.	.	.																	.	.
Template Sequence		M	R	I	L	F	V	A	A	G	S	P	.	.	.	A	T	V	F	A	L	A	P	L	A	T	A	A	R	N	A	.	.	G	H	Q	V	V	M	A	A	N	Q	D	M	G	P	V	V	T	G	V	G	L	P	A	V	A	T	T	D	L	P	I	R	H	F	I	T	T	D	R	E	G	R	P	E	A	I	P	S
Template Known Secondary structure										S	S		.	.	.																T	.	.	T									G	G	G						T	T	T						S		S	S		G	G	G	G	S		B		T	T	S		B					S
Template Predicted Secondary structure													.	.	.																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V	G	P
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		D	P	V	A	Q	A	R	F	T	G	R	W	F	A	R	M	A	A	S	.	.	.	.	.	.	.	S	L	P	R	M	L	D	F	S	R	A	W	R	P	D	L	I	V	G	G	.	.	.	.	.	.	.	.	T	M	S	Y	V	A	P	L	L	A	L	H	L	G	V	P	H	A	R	Q	T	W	D	A	V	D
Template Known Secondary structure		S																			.	.	.	.	.	.	.															S						.	.	.	.	.	.	.	.	T	T		T										T								S	S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		F	Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	.	.	.	.	.	.	.	.	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	G	I	H	P	G	A	D	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	R	P	E	L	S	E	L	G	L	E	R	L	P	A	P	D	L	F	I	D	I	C	P	P	S	L	R	P	A	N	A	A	P	A	R	M	M	R	H	V	A	T	S	R	Q	C	P	L	E	P	W	M	Y	T	R	D
Template Known Secondary structure			T	T	T								T	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S	S					S						S		G	G	G	S		S	S																				G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.													.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	T	V	A	I	T	L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		T	R	Q	R	V	L	V	T	S	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	F	D	F	L	R	G	L	A	K	D	L	V	R	W	D	V	E	L	I	V	A	A	.	.	.	.	.	.	.	.	.	.	.	P	D	T	V	A	E	A	L	R	A	E	V	P	Q	A	.	.	.	.	.	.
Template Known Secondary structure		S	S										.	.	.	.	.	.	.	.	.	.	.	.	.																T	T								.	.	.	.	.	.	.	.	.	.	.													T	T	S	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.														220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.												.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.				.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.														.	.	.
Query SS confidence																														.														.	.	.
Query Sequence		M	D	E	L	N	D	L	E	M	G	K	I	L	G	A	C	E	L	T	V	G	T	R	L	H	S	A	I	.	I	S	M	N	F	A	T	P	A	I	A	I	N	.	.	.	Y	E	H	K	S	A	G	I	M	Q	Q	L	G	L	P	E	M	A	I	D	I	R	H	L	L	D	G	S	L	Q	A	M	V	A	D
Query Conservation																														.														.	.	.
Alig confidence		.	.																											.														.	.	.																.
Template Conservation		.	.																																																											.
Template Sequence		.	.	R	V	G	W	T	P	L	D	V	V	A	P	T	C	D	L	L	V	H	H	A	G	G	V	S	T	L	T	G	L	S	A	G	V	P	Q	L	L	I	P	K	G	S	V	L	E	A	P	A	R	R	V	A	D	Y	G	A	A	.	I	A	L	L	P	G	E	D	S	T	E	A	I	A	D	S	C	Q	E
Template Known Secondary structure		.	.			S								G	G	G		S							S		S									T									S														T	S		.					T	T	T
Template Predicted Secondary structure		.	.																																																											.
Template SS confidence
				267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		T	L	G	Q	L	P	A	L	N	A	R	L	S	E	A	V	S	R	E	R	Q	T	.	G	M	Q	M	V	Q	S	V	L	E	R	I	G	E
Query Conservation																								.
Alig confidence						.																		.
Template Conservation						.
Template Sequence		L	Q	A	K	.	D	T	Y	A	R	R	A	Q	D	L	S	R	E	I	S	G	M	P	L	P	A	T	V	V	T	A	L	E	Q	L	A	H
Template Known Secondary structure						.																T	S
Template Predicted Secondary structure						.
Template SS confidence
		344	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low