Job Description P71242 Confidence 99.18% Date Thu Jan 5 12:12:37 GMT 2012 Rank 5 Aligned Residues 260 % Identity 14% Template c2h1fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:lipopolysaccharide heptosyltransferase-1; PDBTitle: e. coli heptosyltransferase waac with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	L	I	L	G	N	H	T	C	G	N	R	G	D	S	A	I	L	R	G	L	L	D	A	I	N	I	L	N	P	H	A	E	V	D	V	M	S	R	Y	P	V	S	S	S	W	L	L	N	R	P	V	M	G	D	P	L	F	L	Q	M	K	Q	H	N	S	A	A	G	V	V	G	R	V	K	K	V	L
Query Conservation
Alig confidence									.	.	.																																.																																					.	.
Template Conservation									.	.	.																																.																																					.	.
Template Sequence		M	R	V	L	I	V	K	.	.	.	T	S	S	M	G	D	V	L	H	T	L	P	A	L	T	D	A	Q	Q	A	I	P	G	I	K	F	D	W	V	V	E	.	E	G	F	A	Q	I	P	S	W	H	A	A	V	E	R	V	I	P	V	A	I	R	R	W	R	K	R	K	A	F	R	E	A	L	Q	A	.	.
Template Known Secondary structure									.	.	.		S							T	T											S	T	T									.	G	G	G	T	T	G	G	G	G	S	T	T													T										T	S	.	.
Template Predicted Secondary structure									.	.	.																																.																																					.	.
Template SS confidence
		1	.	.	.	.	.	.				.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	R	Y	Q	H	Q	V	L	L	S	R	V	T	D	T	G	K	L	R	N	I	A	I	A	Q	G	F	T	D	F	V	R	L	L	S	G	Y	D	A	I	I	Q	V	G	G	S	F	F	V	D	L	Y	G	V	P	Q	F	E	H	A	L	C	T	F	M	A	K	K	P	L	F	M	I	G	H	S	V	G	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	Y	D	A	V	I	D	A	Q	G	L	V	K	S	A	A	L	V	T	R	L	.	.	.	.	.	.	.	.	.	.	.	A	H	G	V	K	H	G	M	D	W	Q	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B		S						S									T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	S	B	S							T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																					85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	D	E	Q	F	N	Q	L	A	N	Y	V	F	G	H	C	D	A	L	I	L	R	E	S	V	S	F	D	L	M	K	R	S	N	I	T	T	A	K	V	E	H	G	V	D	T	A	W	L	V	D	H	H	T	E	D	F	T	A	S	Y	A	V	Q	H	W	L	D	V	A	A	Q	Q	K	T	V	A	I	T
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	E	P	L	A	S	L	F	Y	N	R	K	H	H	I	A	K	Q	Q	H	A	V	E	R	T	R	E	L	F	A	K	S	L	G	Y	S	K	P	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	D	Y	A	I	A	Q	H	F	L	T	N	G	E	Y	A	V	F	L
Template Known Secondary structure		S	S	S	G	G	G	G	G	G		S							S	S	S															T	S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T					T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	L	A	P	F	D	K	R	L	G	T	T	Q	Q	A	Y	E	K	A	F	A	G	V	V	N	R	I	L	D	E	G	Y	Q	V	I	A	L	S	T	C	T	G	I	D	S	Y	N	K	D	D	R	M	V	A	L	N	L	R	Q	H	I	S	D	P	A	R	Y	H	V	V	M	D	E	L	N	D	L	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.
Template Conservation														.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		H	A	T	T	R	D	D	K	H	W	P	E	.	.	.	.	.	.	.	E	H	W	R	E	L	I	G	L	L	A	D	S	G	I	R	I	K	L	P	.	.	.	.	.	.	.	W	G	A	P	H	E	E	E	R	A	K	R	L	A	E	G	F	A	.	.	.	.	Y	V	E	V	L	P	K	M	S	L	E	G
Template Known Secondary structure					S	S	G	G	G	S				.	.	.	.	.	.	.										T	G	G	G	T							.	.	.	.	.	.	.		S	S												T	T		T	.	.	.	.	T						S
Template Predicted Secondary structure														.	.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.				.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		M	G	K	I	L	G	A	C	E	L	T	V	G	T	.	.	.	R	L	H	S	A	I	I	S	M	N	F	A	T	P	A	I	A	I
Query Conservation																.	.	.
Alig confidence																.	.	.				.	.	.
Template Conservation																						.	.	.
Template Sequence		V	A	R	V	L	A	G	A	K	F	V	V	S	V	D	T	G	L	S	H	.	.	.	L	T	A	A	L	D	R	P	N	I	T	V
Template Known Secondary structure							T	T		S						S	S					.	.	.					T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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