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Job DescriptionP71242
Confidence60.92%DateThu Jan 5 12:12:37 GMT 2012
Rank113Aligned Residues87
% Identity15%Templatec1b8vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVL
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Template Sequence  MRVAVTGA. . AGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ST..TSTTTTT
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   6...10... ......20.........30.........40.........50..
 
   81........90.........100.........110.........120......
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Query Sequence  RRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGG
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Template Sequence  . . . . . . LQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGA
Template Known Secondary structure  ......TTT
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   53......60.........70.........80.........90..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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