 |
| Job Description | P75958 | | Confidence | 5.22% | Date | Thu Jan 5 12:16:27 GMT 2012 |
| Rank | 87 | Aligned Residues | 28 |
| % Identity | 29% | Template | d1dzfa2 |
| SCOP info | RPB5-like RNA polymerase subunit
| RPB5-like RNA polymerase subunit
| RPB5
|
| Resolution | 1.9 |
|
|   |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | I | I | G | K | G | V | A | D | A | L | K | V | K | Q | G | D | W | V | S | I | M | I | P | N | S | N | P |
| Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|
|
|
|   |
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|
|
| Template Sequence |   |
I | Q | R | A | D | P | V | A | L | Y | L | G | L | K | R | G | E | V | V | K | I | I | R | K | S | E | T | S |
| Template Known Secondary structure |   |
 |
| T | T |
|  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |
| T | T |
| S | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|