Return to main results Retrieve Phyre Job Id

Job DescriptionP75958
Confidence85.18%DateThu Jan 5 12:16:27 GMT 2012
Rank3Aligned Residues88
% Identity15%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   261........270.........280.........290.........300.........310.........320.........330.........340
Predicted Secondary structure 


Query SS confidence 















































































Query Sequence  MYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVV
Query Conservation                   
 
 
    
       
  
  








 
   
      
         


  

  
Alig confidence 






























.....











































Template Conservation      
  
      
                .....      
                                     
Template Sequence  LSDISSNLNRFSRGLGYAGKFTSLADWITEF. . . . . GKAVRTENWRPLFVKTETIIAGNAATALVALVFSILTGSALGII
Template Known Secondary structure  T

S
B

.....STT
TTTBTT
BTT


Template Predicted Secondary structure  .....




Template SS confidence 















































































   525....530.........540.........550..... ....560.........570.........580.........590.........
 
   341........350...
Predicted Secondary structure 
Query SS confidence 












Query Sequence  VSLQLTPIIEWIE
Query Conservation      
        
Alig confidence 












Template Conservation               
Template Sequence  GYGLLMAVTGALI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 












   600.........610..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions