Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAS3
Confidence9.02%DateThu Jan 5 11:13:40 GMT 2012
Rank94Aligned Residues27
% Identity30%Templatec3p8bB_
PDB info PDB header:transferase/transcriptionChain: B: PDB Molecule:transcription antitermination protein nusg; PDBTitle: x-ray crystal structure of pyrococcus furiosus transcription2 elongation factor spt4/5
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130......... 140.........150..
Predicted Secondary structure 







..




Query SS confidence 













. .












Query Sequence  SEDLGAGTHVEVIA. . IEGITLHIRAVSS
Query Conservation     
  
  
 

 ..


  
 
 

 
Alig confidence 













..












Template Conservation        

 


  


 
  
 
  

 
Template Sequence  VSGLEPGDLVEVIAGPFKGQKAKVVKIDE
Template Known Secondary structure  TTT

TT

SSTTTT
T
Template Predicted Secondary structure 















Template SS confidence 




























   8990.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions