Job Description P0ADG7 Confidence 73.23% Date Thu Jan 5 11:20:59 GMT 2012 Rank 474 Aligned Residues 151 % Identity 20% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																		.	.	.									.	.	.	.	.	.
Query SS confidence																																				.																		.	.	.									.	.	.	.	.	.
Query Sequence		V	K	D	F	Q	K	A	E	R	K	P	N	A	C	K	D	E	Q	G	R	L	R	V	G	A	A	V	G	A	G	A	G	N	E	.	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	.	.	.	S	S	H	G	H	S	E	G	.	.	.	.	.	.	V	L	Q	R	I	R	E	T	R	A	K
Query Conservation																																				.																		.	.	.									.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.														.																		.	.	.									.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		L	R	D	I	L	N	A	H	G	R	P	I	F	F	G	.	.	.	.	.	.	V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E
Template Known Secondary structure							T			S	S						.	.	.	.	.	.			S	S		S	S																T	T		S						T	T		S	S	B	T	T	B
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.																																																												.	.	.
Query SS confidence															.	.	.	.	.																																																												.	.	.
Query Sequence		Y	P	D	L	Q	I	I	G	G	N	V	A	T	.	.	.	.	.	A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	.	.	.
Query Conservation															.	.	.	.	.																																																												.	.	.
Alig confidence															.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I
Template Known Secondary structure			S	S												G	G	G												T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		S	S							T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.																		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
											340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	I	R	F	S	G	D	I	A	K	A	I	A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E	S	P
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F	G	D	R	V	M	T	P	E
Template Known Secondary structure							S	T	T	S	S														T		S							S	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions