Job Description P0ADG7 Confidence 92.62% Date Thu Jan 5 11:20:59 GMT 2012 Rank 336 Aligned Residues 138 % Identity 21% Template d1wdda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		219	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.
Predicted Secondary structure															.																		.	.	.											.	.	.	.	.	.																						.	.
Query SS confidence															.																		.	.	.											.	.	.	.	.	.																						.	.
Query Sequence		R	V	G	A	A	V	G	A	G	A	G	N	E	.	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	.	.	.	S	S	H	G	H	S	E	G	V	L	.	.	.	.	.	.	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G	G	N	V	A	.	.	T	A	A	G	A	R	A
Query Conservation															.																		.	.	.											.	.	.	.	.	.																						.	.
Alig confidence															.															.			.	.	.											.	.	.	.	.	.																						.	.
Template Conservation																														.
Template Sequence		T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	C	Y	E	C	L	R	G	G	L	D	F	T	.	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	V	F	C	A	E	A	I	Y	K	S	Q	A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	I	K
Template Known Secondary structure				S	S	S	S																	T	T		S	B		.			T	T		S	S	B	T	T	B																					S	S			B								S	S
Template Predicted Secondary structure																														.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
						287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.													.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure		.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	D	G	G	I	R	F	S	G	D	I	A	K	A
Query Conservation		.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G	M	H	F	R	V	L	A	K	A	L
Template Known Secondary structure										T		S											.	.	.	.	.	.	.	.	.	.	.	.	.	.															T								T	T						S		S	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.															.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	S	G	G	D	H	I	H	A	G	T	V	V	G	K	L	E	G	E	R
Template Known Secondary structure							S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions