 |
Job Description | P0ADG7 | Confidence | 99.75% | Date | Thu Jan 5 11:20:59 GMT 2012 |
Rank | 56 | Aligned Residues | 121 |
% Identity | 21% | Template | d1pvma4 |
SCOP info | CBS-domain pair
| CBS-domain pair
| CBS-domain pair
|
Resolution | 1.50 |
|
 |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | K | H | E | S | G | V | V | T | D | P | Q | T | V | L | P | T | T | T | L | R | E | V | K | E | L | T | E | R | N | G | F | A | G | Y | P | V | V | T | E | E | N | E | L | V | G | I | I | T | G | R | D | V | R | F | . |
. |
. |
. |
V | T | D | L | N | Q | P | V | S | V | Y | M | T | P | K | E | R | L | V | T |
Query Conservation |   |
|
|   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
F | M | R | V | E | K | I | M | N | S | N | F | K | T | V | N | W | N | T | T | V | F | D | A | V | K | I | M | N | E | N | H | L | Y | G | L | V | V | K | D | D | N | G | N | D | V | G | L | L | S | E | R | S | I | I | K | R | F | I | P | R | N | K | K | P | D | E | V | P | I | R | L | V | M | R | K | P | I | P | K |
Template Known Secondary structure |   |
|
| B | G | G | G | T | S | B | T | T |
|
|  |  |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
|
|
| G | G | G | S | B | G | G | G | T | S | B | S | S |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | E | G | E | A | R | E | V | V | L | A | K | M | H | E | K | R | V | E | K | A | L | V | V | D | D | E | F | H | L | I | G | M | I | T | V | K | D | F | Q | K | A | E | R |
Query Conservation |   |
|   |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |
|   |
Template Sequence |   |
V | K | S | D | Y | D | V | K | D | V | A | A | Y | L | S | E | N | G | L | E | R | C | A | V | V | D | D | P | G | R | V | V | G | I | V | T | L | T | D | L | S | R | Y | L | S |
Template Known Secondary structure |   |
 |  | T | T |
| B |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|