Job Description P0ADG7 Confidence 98.70% Date Thu Jan 5 11:20:59 GMT 2012 Rank 171 Aligned Residues 170 % Identity 18% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	G	E	A	R	E	V	V	L	A	K	M	H	E	K	R	V	E	K	A	L	V	V	D	D	E	F	H	L	I	G	M	I	T	V	K	D	F	Q	K	A	E	R	K	P	N	A	C	K	D	E	Q	G	R	L	R	V	G	A	A	V	G	A	G	A	G	N	E	E	R	V	D	A	L	V	A	A	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	.	.	.	.	.	.	.	.	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	L	E	K	F	V	K	K	A	K	S	L	G
Template Known Secondary structure				T	T												T			.	.	.	.	.	.	.	.		S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.									.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																									100	.	.	.	.	.	.	.	.	.	110	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	L	L	I	D	S	S	H	G	H	S	E	G	V	L	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G	G	N	V	A	T	A	A	G	A	R	A	L	A	E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V
Query Conservation
Alig confidence							.	.																																																														.	.	.	.	.	.
Template Conservation							.	.																																																														.	.	.	.	.	.
Template Sequence		I	C	A	L	I	.	.	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	.	.	.	.	.	.	E	E	A	I	L	Q
Template Known Secondary structure							.	.		T	T			G	G	G												T									T	T	S										T	T			S								S		S	S						.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																																														.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	S	G	D	I	A	K	A	I	A	A	G	A	S	A	V	M	V	G	S	M	L	A	G	T	E	E	S	P	G
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	.	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N
Template Known Secondary structure									T	T			S						S	S			S	S				.				T	T	T	S	S												T	T	S	S
Template Predicted Secondary structure																												.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions