Job Description P0ADG7 Confidence 89.76% Date Thu Jan 5 11:20:59 GMT 2012 Rank 367 Aligned Residues 125 % Identity 14% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280													.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	A	V	G	A	G	A	G	N	E	E	R	V	D	A	L	V	A	A	G	V	D	V	L	L	I	D	S	S	H	G	H	S	E	G	V	L	Q	R	I	R	E	T	R	A	K	Y	P	D	L	Q	I	I	G	G	N	V	A	T	.	.	.	.	.	.	.	.	.	.	.	.	A	A	G	A	R	A	L	A
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																								.	.	.	.	.
Template Sequence		G	L	P	V	L	T	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R	Q	T	D	F	I	H	A	C	A	R	S	.	.	.	.	.	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A
Template Known Secondary structure		T									S									T	T	.		S						G	G	G	T	T										T	T	.	.	.	.	.	S	S								T	T	S		G	G	G															T
Template Predicted Secondary structure																						.																								.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.										.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		E	A	G	C	S	A	V	K	V	G	I	G	P	G	S	I	C	T	T	R	I	V	T	G	V	G	V	P	Q	I	T	A	V	A	D	A	V	E	A	L	E	G	T	G	I	P	V	I	A	D	G	G	I	R	F	.	.	.	.	.	.	.	.	.	S	G	D	I	A	K	A	I	A	A	G	A	S	A	V	M
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence											.										.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation											.										.	.	.	.	.	.	.	.
Template Sequence		G	L	S	E	D	R	F	M	A	.	C	E	R	G	V	S	F	G	Y	.	.	.	.	.	.	.	.	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F
Template Known Secondary structure		T			S						.								S	S	.	.	.	.	.	.	.	.	S												G	G	G	G	S	S										T						T	T															S
Template Predicted Secondary structure											.										.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		360
Predicted Secondary structure
Query SS confidence
Query Sequence		V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		237

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions