Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADG7
Confidence96.36%DateThu Jan 5 11:20:59 GMT 2012
Rank274Aligned Residues128
% Identity20%Templatec3t07D_
PDB info PDB header:transferase/transferase inhibitorChain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280......... 290.........300..
Predicted Secondary structure 





















..






Query SS confidence 
































































. .












Query Sequence  GAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAE. . AGCSAVKVGIGPG
Query Conservation         

   
  

 
 
 

 
 
        
  

       

 
 
 
 
 
  
  ..



 
 

 
 
Alig confidence 





















..








































..












Template Conservation   




  

 
     

 

..




 
 

  

  
   
    





   

 

 


  










Template Sequence  GITEKDAEDIRFGIKENVDFIA. . ASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDM
Template Known Secondary structure  SS
TT
S
..
TT

ST







STT
S
Template Predicted Secondary structure 






..


















Template SS confidence 















































































   169170.........180.........190 .........200.........210.........220.........230.........240......
 
   303......310.........320.........330.........340... ......350.........360
Predicted Secondary structure 






















............



Query SS confidence 








































. . . . . . . . . . . .
















Query Sequence  SICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRF. . . . . . . . . . . . SGDIAKAIAAGASAVMV
Query Conservation      
      
 

   
           








  ............  

 



 

  
 
Alig confidence 






......



























............
















Template Conservation 



  
...... 

  

 

  
   













  

 












 

 




Template Sequence  GVEIPPE. . . . . . KVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVML
Template Known Secondary structure  S
GG......GTTT

SSSSGGGGTSSS

T
S
Template Predicted Secondary structure 




......














Template SS confidence 





































































   247..250... ......260.........270.........280.........290.........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions