Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADG7
Confidence75.05%DateThu Jan 5 11:20:59 GMT 2012
Rank465Aligned Residues111
% Identity14%Templatec3q45E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250.........260.........270...... ...280.........290. ........300.....
Predicted Secondary structure 














.





.







Query SS confidence 
















































.














.













Query Sequence  AGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG. NVATAAGARALAEAG. CSAVKVGIGPGSIC
Query Conservation      

   
  

 
 
 

 
 
        
  

       

 
. 
 
 
 
  
  

.

 
 

 
 
   
Alig confidence 


















....

















.






.














.









....
Template Conservation    
      
    
  

....

    
      
    . 



 

           
     
 
  
   ....
Template Sequence  ETAIETLTLLEPYNIQHCE. . . . EPVSRNLYTALPKIRQAC. RIPIMADESCCNSFDAERLIQIQACDSFNLKLSK. . . .
Template Known Secondary structure  GGG

S
....

B
GGGGGG
.SS
STT

STT

S
TTT....
Template Predicted Secondary structure 


....







.

















....
Template SS confidence 















































































   198.200.........210...... ...220.........230.... .....240.........250.........260........
 
   306...310.........320.........330.........340.........350......
Predicted Secondary structure 























Query SS confidence 


















































Query Sequence  TTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGAS
Query Conservation   
      
 

   
           








    

 



 

 
Alig confidence  .........









































Template Conservation  ......... 


     
   
   
         

 
   
  



 
Template Sequence  . . . . . . . . . SAGITNALNIIRLAEQAHMPVQVGGFLESRLGFTAAAHVALV
Template Known Secondary structure  .........TTSTT



SS

TS
Template Predicted Secondary structure  .........











Template SS confidence 


















































   269270.........280.........290.........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions