Job Description P0ADG7 Confidence 99.75% Date Thu Jan 5 11:20:59 GMT 2012 Rank 60 Aligned Residues 127 % Identity 19% Template c3ocmB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:putative membrane protein; PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis Resolution 1.80 Å

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		77	.	.	80	.	.	.	.	.	.	.						.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.								.	.																																		.
Query SS confidence													.	.	.	.	.								.	.																																		.
Query Sequence		E	R	Q	A	E	E	V	R	R	V	K	.	.	.	.	.	K	H	E	S	G	V	V	.	.	T	D	P	Q	T	V	L	P	T	T	T	L	R	E	V	K	E	L	T	E	R	N	G	F	A	G	Y	P	V	V	T	E	E	.	N	E	L	V	G	I	I	T	G	R	D	V	R	F	V	T	D	L	N	Q	P
Query Conservation													.	.	.	.	.								.	.																																		.
Alig confidence													.	.	.	.	.								.	.																																		.
Template Conservation
Template Sequence		V	E	E	R	N	X	V	S	G	V	L	T	L	A	E	R	S	I	R	S	I	X	T	P	R	T	D	V	S	W	V	N	I	D	D	D	A	A	T	I	R	Q	Q	L	T	A	A	P	H	S	F	F	P	V	C	R	G	S	L	D	E	V	V	G	I	G	R	A	K	D	L	V	A	D	L	I	T	E	G	R
Template Known Secondary structure												T	T	G	G	G	S						S			G	G	G						T	T	S												S			S						S	S	S	T	T	S																		S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	Y	M	T	P	K	E	R	L	V	T	V	R	E	G	E	A	R	E	V	V	L	A	K	M	H	E	K	R	V	E	K	A	L	V	V	D	D	E	F	H	L	I	G	M	I	T	V	K	D	F	Q	K	A	E
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		V	R	R	N	R	.	.	L	R	D	P	I	I	V	H	E	S	I	G	I	L	R	L	X	D	T	L	K	R	S	R	G	Q	L	V	L	V	A	D	E	F	G	A	I	E	G	L	V	T	P	I	D	V	F	E	A	I
Template Known Secondary structure				G	G	G	.	.	S	B							G	G	G													T	T								T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		397	.	.	400	.			.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions